RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 COX15Q7KZN9 410 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 PPP1R32Q7Z5V6 425 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 METTL27Q8N6F8 245 aaPredicted RBP24.75■■□□□ 1.55
U2AF1-206ENST00000464750 CD200R1Q8TD46 325 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.75■■□□□ 1.55
U2AF1-206ENST00000464750 FER1L6-AS2Q96M78 137 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 IARS2Q9NSE4 1012 aaKnown RBP24.75■■□□□ 1.55
U2AF1-206ENST00000464750 P4HTMQ9NXG6 502 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 DHRS7Q9Y394 339 aa24.75■■□□□ 1.55
U2AF1-206ENST00000464750 FLNCQ14315 2725 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 USP27XA6NNY8 438 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 ONECUT2O95948 504 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 ENO3P13929 434 aaPredicted RBP24.74■■□□□ 1.55
U2AF1-206ENST00000464750 PNLIPRP1P54315 467 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 DHX9Q08211 1270 aaKnown RBP24.74■■□□□ 1.55
U2AF1-206ENST00000464750 DCAF10Q5QP82 559 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 OVCH1Q7RTY7 1134 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 CPNE9Q8IYJ1 553 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 INPP5DQ92835 1189 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 SLCO2A1Q92959 643 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 ZFYVE21Q9BQ24 234 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 MRPS30Q9NP92 439 aaKnown RBP24.74■■□□□ 1.55
U2AF1-206ENST00000464750 TAC3Q9UHF0 121 aa24.74■■□□□ 1.55
U2AF1-206ENST00000464750 PTPN13Q12923 2485 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 LOC105369274A0A096LPK9 316 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 LOC102723532A0A0G2JNH3 316 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 ZNF839A8K0R7 811 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 BANF1O75531 89 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 HAUS5O94927 633 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 SLC16A8O95907 504 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 SYF2O95926 243 aaKnown RBP24.73■■□□□ 1.55
U2AF1-206ENST00000464750 IGHEP01854 428 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 ALBP02768 609 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 HSD17B2P37059 387 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 FAM214AQ32MH5 1076 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 PCGF5Q86SE9 256 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 OR4N4Q8N0Y3 316 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 DTWD1Q8N5C7 304 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 CLEC1AQ8NC01 280 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 FBXO15Q8NCQ5 510 aaPredicted RBP24.73■■□□□ 1.55
U2AF1-206ENST00000464750 PPFIBP2Q8ND30 876 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 AARSD1Q9BTE6 412 aaKnown RBP24.73■■□□□ 1.55
U2AF1-206ENST00000464750 WDR54Q9H977 334 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 ANKMY1Q9P2S6 941 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 PCYOX1Q9UHG3 505 aa24.73■■□□□ 1.55
U2AF1-206ENST00000464750 HECTD1Q9ULT8 2610 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 HYKKA2RU49 373 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 TTLL8A6PVC2 850 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 DPM1O60762 260 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 VPS26AO75436 327 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 CCNDBP1O95273 360 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 MED26O95402 600 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 EIF2S1P05198 315 aaKnown RBP24.72■■□□□ 1.55
U2AF1-206ENST00000464750 ERVK-10P10266 1014 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 OR1D4P47884 311 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 NKG7Q16617 165 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 PIWIL4Q7Z3Z4 852 aaKnown RBP24.72■■□□□ 1.55
U2AF1-206ENST00000464750 ZNF480Q8WV37 535 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 ASB11Q8WXH4 323 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 CAPZA3Q96KX2 299 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 SPSB2Q99619 263 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 SMAD5Q99717 465 aaKnown RBP24.72■■□□□ 1.55
U2AF1-206ENST00000464750 EBNA1BP2Q99848 306 aaKnown RBP24.72■■□□□ 1.55
U2AF1-206ENST00000464750 PLCD4Q9BRC7 762 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 SLC26A1Q9H2B4 701 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 CTSFQ9UBX1 484 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 ZC3H7BQ9UGR2 993 aaKnown RBP24.72■■□□□ 1.55
U2AF1-206ENST00000464750 MAU2Q9Y6X3 613 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 RELNP78509 3460 aa24.72■■□□□ 1.55
U2AF1-206ENST00000464750 CD97P48960 835 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 MSS51Q4VC12 460 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 VWA5B1Q5TIE3 1220 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 ICE2Q659A1 982 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 CYHR1Q6ZMK1 362 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 ATCAYQ86WG3 371 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 PAQR7Q86WK9 346 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 HPS6Q86YV9 775 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 C2CD4AQ8NCU7 369 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-206ENST00000464750 NDNQ99608 321 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 ABCF3Q9NUQ8 709 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 TRMT6Q9UJA5 497 aaKnown RBP24.71■■□□□ 1.55
U2AF1-206ENST00000464750 CDC23Q9UJX2 597 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 NXT1Q9UKK6 140 aaKnown RBP24.71■■□□□ 1.55
U2AF1-206ENST00000464750 DOPEY2Q9Y3R5 2298 aa24.71■■□□□ 1.55
U2AF1-206ENST00000464750 IGKV1-8A0A0C4DH67 115 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 E7ENX8 843 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 GFYI3L273 518 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 MASP2O00187 686 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 SMAPO00193 183 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 SORBS2O94875 1100 aaKnown RBP24.7■■□□□ 1.54
U2AF1-206ENST00000464750 TTC4O95801 387 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 MMP11P24347 488 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 TAP2Q03519 686 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 BBS9Q3SYG4 887 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 SPANXN3Q5MJ09 141 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 FBXO42Q6P3S6 717 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 SHISA6Q6ZSJ9 500 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 UBE2R2Q712K3 238 aaPredicted RBP24.7■■□□□ 1.54
U2AF1-206ENST00000464750 KLHL7Q8IXQ5 586 aa24.7■■□□□ 1.54
U2AF1-206ENST00000464750 GALNT16Q8N428 558 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms