RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 G2E3Q7L622 706 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 SPATA21Q7Z572 469 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 KRT77Q7Z794 578 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 FAM219AQ8IW50 185 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 KIRREL3Q8IZU9 778 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 NIPA2Q8N8Q9 360 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 C9orf43Q8TAL5 461 aaPredicted RBP3.8□□□□□ -1.8
USP9X-204ENST00000463829 DYRK2Q92630 601 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 LRR1Q96L50 414 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 SPATA33Q96N06 139 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 PPANQ9NQ55 473 aaKnown RBP3.8□□□□□ -1.8
USP9X-204ENST00000463829 ZNF71Q9NQZ8 489 aaPredicted RBP3.8□□□□□ -1.8
USP9X-204ENST00000463829 DDX43Q9NXZ2 648 aaKnown RBP3.8□□□□□ -1.8
USP9X-204ENST00000463829 MDFICQ9P1T7 246 aa3.8□□□□□ -1.8
USP9X-204ENST00000463829 MYH14Q7Z406 1995 aaKnown RBP3.8□□□□□ -1.8
USP9X-204ENST00000463829 DISP3Q9P2K9 1392 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 HTR3EA5X5Y0 456 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 EPHB6O15197 1021 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 SOCS5O75159 536 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 CDC123O75794 336 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 DDHD2O94830 711 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 MOCS3O95396 460 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 PLGP00747 810 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 GBAP04062 536 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 GPIP06744 558 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 GP1BBP13224 206 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 DARSP14868 501 aaKnown RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 RGS7P49802 495 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 NR0B1P51843 470 aaKnown RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 CRIP2P52943 208 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 GSDMDP57764 484 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 GCNT1Q02742 428 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 RASGEF1BQ0VAM2 473 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 FAM174BQ3ZCQ3 159 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 FFAR4Q5NUL3 377 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 GFI1BQ5VTD9 330 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 ZNF449Q6P9G9 518 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 ZNF790Q6PG37 636 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 PSRC1Q6PGN9 363 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 DNAJB7Q7Z6W7 309 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 LSMEM2Q8N112 164 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 OR2T11Q8NH01 316 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 DEPDC1BQ8WUY9 529 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 NR4A3Q92570 626 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 NSMAFQ92636 917 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 PGM2Q96G03 612 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 LITAFQ99732 161 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 RBM4Q9BWF3 364 aaKnown RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 SNX25Q9H3E2 840 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 CHCHD3Q9NX63 227 aaKnown RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 OR6C2Q9NZP2 312 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 C19orf25Q9UFG5 118 aaPredicted RBP3.79□□□□□ -1.8
USP9X-204ENST00000463829 MAN1B1Q9UKM7 699 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 CHKBQ9Y259 395 aa3.79□□□□□ -1.8
USP9X-204ENST00000463829 A0A087WW49 117 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 TRAV34A0A0B4J273 112 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 A0A1W2PPW3 197 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 EDIL3O43854 480 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 SIX3O95343 332 aaPredicted RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 RAF1P04049 648 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 TCF4P15884 667 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 CRKLP46109 303 aaKnown RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 MTCP1P56278 107 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 PPARDQ03181 441 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 TRAP1Q12931 704 aaKnown RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 ITGA9Q13797 1035 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 NONOQ15233 471 aaKnown RBP eCLIP3.78□□□□□ -1.8
USP9X-204ENST00000463829 PTGISQ16647 500 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 SLC25A53Q5H9E4 307 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 LRRC73Q5JTD7 316 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 SPOUT1Q5T280 376 aaKnown RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 FAM91A1Q658Y4 838 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 UGT3A1Q6NUS8 523 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
USP9X-204ENST00000463829 DCLRE1AQ6PJP8 1040 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 GALNTL5Q7Z4T8 443 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 SPATA19Q7Z5L4 167 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 NRARPQ7Z6K4 114 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 AMIGO1Q86WK6 493 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 TMEM178AQ8NBL3 297 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 DDHD1Q8NEL9 900 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 FAM162AQ96A26 154 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 MAP3K3Q99759 626 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 CCDC3Q9BQI4 270 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 ACTL8Q9H568 366 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 ATP13A3Q9H7F0 1226 aa3.78□□□□□ -1.8
USP9X-204ENST00000463829 EXTL3O43909 919 aa3.77□□□□□ -1.81
USP9X-204ENST00000463829 VIMP08670 466 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms