RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SLC30A3Q99726 388 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 DPH7Q9BTV6 452 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 FBXO6Q9NRD1 293 aaPredicted RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 STOX2Q9P2F5 926 aaPredicted RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 CDC23Q9UJX2 597 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 MAU2Q9Y6X3 613 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 FAM169AQ9Y6X4 670 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 RP1L1Q8IWN7 2480 aaPredicted RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 OR2A25A4D2G3 310 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 MYO1CO00159 1063 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 MED26O95402 600 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 ALPPP05187 535 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 ERGP11308 486 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 TSTA3Q13630 321 aaPredicted RBP18.02■□□□□ 0.48
SF3A1-205ENST00000463818 SHISA6Q6ZSJ9 500 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 RNF44Q7L0R7 432 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 SIGLEC10Q96LC7 697 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 NAP1L3Q99457 506 aaPredicted RBP18.02■□□□□ 0.48
SF3A1-205ENST00000463818 SOX17Q9H6I2 414 aaPredicted RBP18.02■□□□□ 0.48
SF3A1-205ENST00000463818 FAM114A2Q9NRY5 505 aa18.02■□□□□ 0.48
SF3A1-205ENST00000463818 SNRNP200O75643 2136 aaKnown RBP18.02■□□□□ 0.47
SF3A1-205ENST00000463818 FER1L5A0AVI2 2057 aa18.02■□□□□ 0.47
SF3A1-205ENST00000463818 COL12A1Q99715 3063 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 LRRK2Q5S007 2527 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 PGRMC1O00264 195 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 SOCS6O14544 535 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 KIF5CO60282 957 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 CATP04040 527 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 ITGA3P26006 1051 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 VARSP26640 1264 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 RPA3P35244 121 aaPredicted RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 HSD17B2P37059 387 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 AIMP2Q13155 320 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 ARHGAP19Q14CB8 494 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 NAA25Q14CX7 972 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 TTLL9Q3SXZ7 439 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 FHL5Q5TD97 284 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF549Q6P9A3 640 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 KIRREL2Q6UWL6 708 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 IGFL3Q6UXB1 125 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 NEK10Q6ZWH5 1172 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 AGGF1Q8N302 714 aaeCLIP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 C19orf60Q96EN9 201 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 ZFYVE21Q9BQ24 234 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 PLCD4Q9BRC7 762 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 CCDC68Q9H2F9 335 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF304Q9HCX3 659 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 SLC6A20Q9NP91 592 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 MRPS30Q9NP92 439 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 C20orf96Q9NUD7 363 aaPredicted RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 MAP10Q9P2G4 905 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 KLHL42Q9P2K6 505 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 CTSFQ9UBX1 484 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 FBXL4Q9UKA2 621 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 NXT1Q9UKK6 140 aaKnown RBP18.01■□□□□ 0.47
SF3A1-205ENST00000463818 MED16Q9Y2X0 877 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 MAD1L1Q9Y6D9 718 aa18.01■□□□□ 0.47
SF3A1-205ENST00000463818 SPENQ96T58 3664 aaKnown RBP18■□□□□ 0.47
SF3A1-205ENST00000463818 VSTM2BA6NLU5 285 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 H0YGG7 62 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 IPO13O94829 963 aaKnown RBP18■□□□□ 0.47
SF3A1-205ENST00000463818 MAGEA3P43357 314 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 PNLIPRP1P54315 467 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 ARF3P61204 181 aaPredicted RBP18■□□□□ 0.47
SF3A1-205ENST00000463818 PRDX1Q06830 199 aaKnown RBP18■□□□□ 0.47
SF3A1-205ENST00000463818 CUL1Q13616 776 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 LONRF1Q17RB8 773 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 PRTGQ2VWP7 1150 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 CYHR1Q6ZMK1 362 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 SLC35F6Q8N357 371 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 ZADH2Q8N4Q0 377 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 NAT8LQ8N9F0 302 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 GIMAP7Q8NHV1 300 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 ASB11Q8WXH4 323 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 INPP5DQ92835 1189 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 PSMG3-AS1Q96PY0 264 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 ZBTB20Q9HC78 741 aaPredicted RBP18■□□□□ 0.47
SF3A1-205ENST00000463818 SEMA3GQ9NS98 782 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 B3GNT3Q9Y2A9 372 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 DHRS7Q9Y394 339 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 HS3ST3B1Q9Y662 390 aa18■□□□□ 0.47
SF3A1-205ENST00000463818 CCDC88CQ9P219 2028 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 BLACEA4D250 179 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF839A8K0R7 811 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 TCP11X1B4DZS4 312 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 ALOX12BO75342 701 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 HAUS5O94927 633 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 MPC1LP0DKB6 136 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 ERVK-10P10266 1014 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 GP1BBP13224 206 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 SLC1A2P43004 574 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 OCA2Q04671 838 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 RBBP7Q16576 425 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 MUM1Q2TAK8 710 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 PRAMEF13Q5VWM6 474 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 PRMT9Q6P2P2 845 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 PAQR7Q86WK9 346 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 PARP9Q8IXQ6 854 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 LMNTD2Q8IXW0 634 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms