RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CELA2AP08217 269 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 PMP22Q01453 160 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 POU6F1Q14863 301 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF766Q5HY98 468 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 UNC5DQ6UXZ4 953 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 CNTRLQ7Z7A1 2325 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 LUZP1Q86V48 1076 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 RAB42Q8N4Z0 105 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 THAP3Q8WTV1 239 aaPredicted RBP13.77□□□□□ -0.21
SMC1A-204ENST00000463684 ASZ1Q8WWH4 475 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 CABS1Q96KC9 395 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 C14orf105Q9NVL8 296 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 IFNKQ9P0W0 207 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 STOX2Q9P2F5 926 aaPredicted RBP13.77□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 MEMO1Q9Y316 297 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 CCDC168Q8NDH2 2452 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 LOC105369274A0A096LPK9 316 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 TTI1O43156 1089 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 WISP2O76076 250 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 RBP3P10745 1247 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 CCR7P32248 378 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 EIF3EP60228 445 aaKnown RBP13.76□□□□□ -0.21
SMC1A-204ENST00000463684 GRB7Q14451 532 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 CDSNQ15517 529 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 MEX3BQ6ZN04 569 aaKnown RBP13.76□□□□□ -0.21
SMC1A-204ENST00000463684 Q6ZPB1 254 aaPredicted RBP13.76□□□□□ -0.21
SMC1A-204ENST00000463684 NEK10Q6ZWH5 1172 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 VRK3Q8IV63 474 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 OR4N4Q8N0Y3 316 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 ACTL9Q8TC94 416 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 GPR137Q96N19 417 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 MIPEPQ99797 713 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF700Q9H0M5 742 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
SMC1A-204ENST00000463684 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 NEU2Q9Y3R4 380 aa13.76□□□□□ -0.21
SMC1A-204ENST00000463684 PKDREJQ9NTG1 2253 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 ITPR3Q14573 2671 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 OR51F1A6NGY5 319 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 A8MUI8 341 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 OR1I1O60431 355 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 NADKO95544 446 aaPredicted RBP13.75□□□□□ -0.21
SMC1A-204ENST00000463684 APOA4P06727 396 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 TPM3P06753 285 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 ANXA5P08758 320 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 COPS2P61201 443 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 CSNK1G2P78368 415 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 ALDH6A1Q02252 535 aaKnown RBP13.75□□□□□ -0.21
SMC1A-204ENST00000463684 DSG2Q14126 1118 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 GSDMBQ8TAX9 411 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 CA5BP1Q8WTZ4 195 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 CHP1Q99653 195 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 ZFYVE21Q9BQ24 234 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 TUBB6Q9BUF5 446 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 ENKD1Q9H0I2 346 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 LRRC40Q9H9A6 602 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 MKKSQ9NPJ1 570 aaPredicted RBP13.75□□□□□ -0.21
SMC1A-204ENST00000463684 PCDHGB6Q9Y5F9 930 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 KLK4Q9Y5K2 254 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 MRFAP1Q9Y605 127 aa13.75□□□□□ -0.21
SMC1A-204ENST00000463684 LOC102723996A0A087X1L8 192 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 CCDC162PA2VCL2 907 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 RCCD1A6NED2 376 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MROH6A6NGR9 719 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 FFAR3O14843 346 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 GPR42O15529 346 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 GPC4O75487 556 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF189O75820 626 aaPredicted RBP13.74□□□□□ -0.21
SMC1A-204ENST00000463684 ABOP16442 354 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 FOXN2P32314 431 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MARCKSL1P49006 195 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 EMP3P54852 163 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 TRIM14Q14142 442 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 NAA25Q14CX7 972 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 PCOLCEQ15113 449 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 TMED2Q15363 201 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 PARP6Q2NL67 630 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 EID3Q8N140 333 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 OR2L3Q8NG85 312 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 METTL21AQ8WXB1 218 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MVB12AQ96EY5 273 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MMABQ96EY8 250 aaPredicted RBP13.74□□□□□ -0.21
SMC1A-204ENST00000463684 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 C10orf90Q96M02 699 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 TGIF2Q9GZN2 237 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 GOLPH3Q9H4A6 298 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 PIH1D1Q9NWS0 290 aaKnown RBP13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MKL2Q9ULH7 1088 aa13.74□□□□□ -0.21
SMC1A-204ENST00000463684 MED13LQ71F56 2210 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms