RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 BORAQ6PGQ7 559 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SLC30A9Q6PML9 568 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GDPD4Q6W3E5 623 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TRIM69Q86WT6 500 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CARM1Q86X55 608 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PROSER1Q86XN7 944 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ALDH16A1Q8IZ83 802 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ADGRG5Q8IZF4 528 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NXPE1Q8N323 547 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ZBTB2Q8N680 514 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 OR52B6Q8NGF0 335 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 OR6K2Q8NGY2 324 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 METTL6Q8TCB7 284 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PROKR1Q8TCW9 393 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CANT1Q8WVQ1 401 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 RAB7BQ96AH8 199 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NTMT1Q9BV86 223 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ZDHHC5Q9C0B5 715 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ALG2Q9H553 416 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NOL11Q9H8H0 719 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SARS2Q9NP81 518 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 DKK3Q9UBP4 350 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TRPS1Q9UHF7 1281 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ASB1Q9Y576 335 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TNRC6BQ9UPQ9 1833 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TCRBV5S2A0A599 114 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 C7orf72A4D263 438 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 C16orf96A6NNT2 1141 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ZNF839A8K0R7 811 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 SLC30A4O14863 429 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TM4SF5O14894 197 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ANKRD28O15084 1053 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ARPC2O15144 300 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TAPBPO15533 448 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CAPN1P07384 714 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ADRB3P13945 408 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 NSG1P42857 185 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 GSK3BP49841 420 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 AFF3P51826 1226 aaKnown RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ATXN3P54252 364 aaPredicted RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 NME5P56597 212 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 UFM1P61960 85 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ROR2Q01974 943 aaKnown RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 PTPRRQ15256 657 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CNPY1Q3B7I2 92 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 MTX3Q5HYI7 312 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 PAGE3Q5JUK9 113 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 STPG1Q5TH74 334 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 FAM219BQ5XKK7 198 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 FAM151BQ6UXP7 276 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 HID1Q8IV36 788 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 SFRP1Q8N474 314 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 FNDC5Q8NAU1 212 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TRPV3Q8NET8 790 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 OR4F6Q8NGB9 312 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ULK4Q96C45 1275 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 SCRN2Q96FV2 425 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CENPNQ96H22 339 aaPredicted RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ZNF641Q96N77 438 aaPredicted RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 C9orf16Q9BUW7 83 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 ANKRD60Q9BZ19 345 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 SLC29A3Q9BZD2 475 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CD244Q9BZW8 370 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 TM9SF3Q9HD45 589 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 PAPOLBQ9NRJ5 636 aaKnown RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 KCTD5Q9NXV2 234 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CRLS1Q9UJA2 301 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CDV3Q9UKY7 258 aaKnown RBP9.63□□□□□ -0.87
PTPRD-207ENST00000463477 DMTF1Q9Y222 760 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 AP3M1Q9Y2T2 418 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 CCL27Q9Y4X3 112 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 FADS3Q9Y5Q0 445 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 COMMD3-BMI1R4GMX3 469 aa9.63□□□□□ -0.87
PTPRD-207ENST00000463477 IQCF5A8MTL0 148 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 K7EPI3 171 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 SLC28A1O00337 649 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 RGS14O43566 566 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 RNGTTO60942 597 aaKnown RBP9.62□□□□□ -0.87
PTPRD-207ENST00000463477 SLC25A14O95258 325 aaPredicted RBP9.62□□□□□ -0.87
PTPRD-207ENST00000463477 CLDN7O95471 211 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 CLPTM1O96005 669 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TFAP2AP05549 437 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 UGT2B4P06133 528 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 EBLN1P0CF75 366 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 FASP25445 335 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 IL12AP29459 219 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 HMOX2P30519 316 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 GGT5P36269 586 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 LIPEQ05469 1076 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 GBX1Q14549 363 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 C6orf52Q5T4I8 152 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms