RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TTI1O43156 1089 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 CNOT3O75175 753 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 SEC31AO94979 1220 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 CCNDBP1O95273 360 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 WISP1O95388 367 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PDGFAP04085 211 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 CD63P08962 238 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ITGAXP20702 1163 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ALAS2P22557 587 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 HSD17B2P37059 387 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PAFAH1B1P43034 410 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PGDP52209 483 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ITGA8P53708 1063 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 RRADP55042 308 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 FOXL2P58012 376 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 VSX2P58304 361 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 YBX1P67809 324 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 HIF1AQ16665 826 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 COLEC12Q5KU26 742 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 RBM20Q5T481 1227 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 FRMPD2BQ6IN97 320 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 UGT3A1Q6NUS8 523 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 HIBCHQ6NVY1 386 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 KIAA0408Q6ZU52 694 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 UBE2R2Q712K3 238 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 IGDCC3Q8IVU1 814 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 METTL27Q8N6F8 245 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PPFIBP2Q8ND30 876 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 OR2Y1Q8NGV0 311 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ZNF480Q8WV37 535 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 FKBP10Q96AY3 582 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 CFAP36Q96G28 342 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 SNF8Q96H20 258 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ZFYVE21Q9BQ24 234 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 WDR83Q9BRX9 315 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 DPH7Q9BTV6 452 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 SLC25A23Q9BV35 468 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 TRIM31Q9BZY9 425 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 MRPS30Q9NP92 439 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PPANQ9NQ55 473 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ENAMQ9NRM1 1142 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ANKMY1Q9P2S6 941 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ZC3H7BQ9UGR2 993 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 G3BP2Q9UN86 482 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 PCDHGA9Q9Y5G4 932 aaKnown RBP9.74□□□□□ -0.85
SF3A3-204ENST00000462258 ANKRD12Q6UB98 2062 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 IGKV1-8A0A0C4DH67 115 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 FITM1A5D6W6 292 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ZBTB14O43829 449 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 SRPX2O60687 465 aaPredicted RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CEACAM4O75871 244 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 IMPA1P29218 277 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ELK3P41970 407 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 SKIV2L2P42285 1042 aaKnown RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CARSP49589 748 aaKnown RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 RGS4P49798 205 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CSRP3P50461 194 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CCL11P51671 97 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ARL4CP56559 192 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 TBPL1P62380 186 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 SP140Q13342 867 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 HP1BP3Q5SSJ5 553 aaPredicted RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ICE2Q659A1 982 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 STEAP4Q687X5 459 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 MED25Q71SY5 747 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 COX15Q7KZN9 410 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 GALNT7Q86SF2 657 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 PAQR7Q86WK9 346 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 MYO1HQ8N1T3 1032 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 TMEM102Q8N9M5 508 aaPredicted RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 TEX19Q8NA77 164 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ASB11Q8WXH4 323 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 LRRC39Q96DD0 335 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 PWWP2AQ96N64 755 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 IP6K3Q96PC2 410 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 KRT12Q99456 494 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 PLCD4Q9BRC7 762 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CLMPQ9H6B4 373 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CCDC177Q9NQR7 707 aaPredicted RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 SLC22A11Q9NSA0 550 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ABCF3Q9NUQ8 709 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 TAS2R13Q9NYV9 303 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 RNF14Q9UBS8 474 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 CTSFQ9UBX1 484 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 TEX264Q9Y6I9 313 aa9.73□□□□□ -0.85
SF3A3-204ENST00000462258 ASH1LQ9NR48 2969 aaKnown RBP9.73□□□□□ -0.85
SF3A3-204ENST00000462258 LOC105369274A0A096LPK9 316 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 LOC102723532A0A0G2JNH3 316 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 HYKKA2RU49 373 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 EFCAB8A8MWE9 144 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 E7ENX8 843 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 GFYI3L273 518 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PEX12O00623 359 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 MED26O95402 600 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ALBP02768 609 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 EIF2S1P05198 315 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 C8GP07360 202 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 UMODP07911 640 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms