RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TCTN2Q96GX1 697 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCDC138Q96M89 665 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TRAPPC9Q96Q05 1148 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PKP4Q99569 1192 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NRTNQ99748 197 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MENTQ9BUN1 341 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CHRNA10Q9GZZ6 450 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CLMPQ9H6B4 373 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ACSS3Q9H6R3 686 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GPAMQ9HCL2 828 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MRPS18BQ9Y676 258 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HBQ1P09105 142 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ERGP11308 486 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ST6GAL1P15907 406 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF37AP17032 561 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 F8A1P23610 371 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PTPN4P29074 926 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CRABP2P29373 138 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RPA3P35244 121 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CSRP3P50461 194 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PMS2P54278 862 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GPR19Q15760 415 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LACTB2Q53H82 288 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FBXO38Q6PIJ6 1188 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TAOK1Q7L7X3 1001 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SYTL1Q8IYJ3 562 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LMNTD1Q8N9Z9 388 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DENND1AQ8TEH3 1009 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ATL1Q8WXF7 558 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 THAP4Q8WY91 577 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF501Q96CX3 271 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CLIP3Q96DZ5 547 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PPM1MQ96MI6 270 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 UTP6Q9NYH9 597 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ANAPC2Q9UJX6 822 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NOVA2Q9UNW9 492 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PDE10AQ9Y233 779 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MAN2B2Q9Y2E5 1009 aa12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SNRNP200O75643 2136 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PIEZO2Q9H5I5 2752 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TARM1B6A8C7 271 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TMEM150CB9EJG8 249 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PRICKLE3O43900 615 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FAM155BO75949 473 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TIAF1O95411 115 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TSPAN12O95859 305 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC16A8O95907 504 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C1QAP02745 245 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 INHBAP08476 426 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ENO2P09104 434 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MSL3P1P0C860 447 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PVRP15151 417 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CMPK1P30085 196 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MSH2P43246 934 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SERPINB9P50453 376 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 AP1S2P56377 157 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RAB10P61026 200 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NFKB2Q00653 900 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RAPH1Q70E73 1250 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SYVN1Q86TM6 617 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CEP97Q8IW35 865 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GPR135Q8IZ08 494 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PCBD2Q9H0N5 130 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ACTL8Q9H568 366 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CTNNAL1Q9UBT7 734 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ADAMTS6Q9UKP5 1117 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 KCNMB2Q9Y691 235 aa12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GCN1Q92616 2671 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-207ENST00000461009 E7ENX8 843 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 E7EQ34 232 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RFPL1O75677 317 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZIC2O95409 532 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ABHD2P08910 425 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCDC166P0CW27 439 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 AGXTP21549 392 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCND1P24385 295 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TNFRSF8P28908 595 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ITGA1P56199 1179 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ATP6V0D1P61421 351 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms