RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CCDC177Q9NQR7 707 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 INTS7Q9NVH2 962 aaKnown RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FOXJ2Q9P0K8 574 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 B3GALT1Q9Y5Z6 326 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 DMXL2Q8TDJ6 3036 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 CDRT15L2A8MXV6 281 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 TAPBPO15533 448 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 KERAO60938 352 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 CDH16O75309 829 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 CTSBP07858 339 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 MTHFD2P13995 350 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
HDLBP-229ENST00000460826 CMPK1P30085 196 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 SLC5A2P31639 672 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-229ENST00000460826 SLC6A12P48065 614 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
HDLBP-229ENST00000460826 IFFO1Q0D2I5 559 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 TUBB3Q13509 450 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ACAP2Q15057 778 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 RASA2Q15283 850 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 PTCHD3Q3KNS1 767 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 THEMIS2Q5TEJ8 643 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 UNQ6494/PRO21346Q6UXR6 183 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 SH2D5Q6ZV89 423 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 DNAJC22Q8N4W6 341 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 RHEBL1Q8TAI7 183 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ATL1Q8WXF7 558 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ESAMQ96AP7 390 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-229ENST00000460826 OR4K3Q96R72 315 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 TAAR9Q96RI9 348 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 DPH7Q9BTV6 452 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 PDE7BQ9NP56 450 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 MRPS30Q9NP92 439 aaKnown RBP13.46□□□□□ -0.25
HDLBP-229ENST00000460826 FBXO8Q9NRD0 319 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 FGF21Q9NSA1 209 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 CD274Q9NZQ7 290 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 ASB1Q9Y576 335 aa13.46□□□□□ -0.25
HDLBP-229ENST00000460826 SUPT3HB4E1H0 165 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TLX3O43711 291 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CTSVO60911 334 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 SUPT3HO75486 399 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 FKBP9O95302 570 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TIAF1O95411 115 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 MT-ND3P03897 115 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 PYGBP11216 843 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 COL6A2P12110 1019 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 NPPBP16860 134 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 GDF5P43026 501 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 ACY1Q03154 408 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TMTC4Q5T4D3 741 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CAPN13Q6MZZ7 669 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-229ENST00000460826 LCTLQ6UWM7 567 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 PDPRQ8NCN5 879 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 OR1L3Q8NH93 324 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TCTN2Q96GX1 697 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
HDLBP-229ENST00000460826 SYNPO2LQ9H987 977 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 NUDT4Q9NZJ9 180 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 LGALS13Q9UHV8 139 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 PTBP2Q9UKA9 531 aaKnown RBP13.45□□□□□ -0.26
HDLBP-229ENST00000460826 PCDHGA3Q9Y5H0 932 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
HDLBP-229ENST00000460826 CELSR3Q9NYQ7 3312 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 OR2A25A4D2G3 310 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 TARM1B6A8C7 271 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM150CB9EJG8 249 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 NVLO15381 856 aaKnown RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ERLIN1O75477 346 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 CCNDBP1O95273 360 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 SBK3P0C264 359 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 FGF5P12034 268 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 CDH1P12830 882 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 KRT15P19012 456 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 CCND1P24385 295 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 HSPA7P48741 367 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 HNMTP50135 292 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 RAB15P59190 212 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ABATP80404 500 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 DCAF12Q5T6F0 453 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 SULT1C3Q6IMI6 304 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF425Q6IV72 752 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms