RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IFNA1P01562 189 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ANXA8P13928 327 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 TMCO2Q7Z6W1 182 aaPredicted RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 NIPA2Q8N8Q9 360 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 POC1BQ8TC44 478 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 HAPLN3Q96S86 360 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 DPEP2Q9H4A9 486 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 MYNNQ9NPC7 610 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 UBIAD1Q9Y5Z9 338 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 NCOR1O75376 2440 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 NUP188Q5SRE5 1749 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 SH3PXD2BA1X283 911 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 M0R036 132 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 FAM189A1O60320 539 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 PPM1BO75688 479 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 GADD45GO95257 159 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 S100A7P31151 101 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 IL10RBQ08334 325 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ADAM15Q13444 863 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 DUSP28Q4G0W2 176 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 RNASE12Q5GAN4 147 aaKnown RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 LSM14AQ8ND56 463 aaKnown RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 C1orf109Q9NX04 203 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 PDE10AQ9Y233 779 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 CLCQ05315 142 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 OGFRL1Q5TC84 451 aaPredicted RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 LCLAT1Q6UWP7 414 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF676Q8N7Q3 588 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 OR4K17Q8NGC6 315 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ELP5Q8TE02 316 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 NXNL1Q96CM4 212 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 TSSK3Q96PN8 268 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 WDR26Q9H7D7 661 aa8.7□□□□□ -1.02
SHROOM4-203ENST00000460112 ASTN1O14525 1302 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 GABRDO14764 452 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 FAM163BP0C2L3 166 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CRTC2Q53ET0 693 aaPredicted RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 MAP1SQ66K74 1059 aaPredicted RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 RBM23Q86U06 439 aaKnown RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 LHFPL3Q86UP9 236 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ALDH16A1Q8IZ83 802 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 NAT16Q8N8M0 369 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PEX13Q92968 403 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 NPAS2Q99743 824 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 OR10A4Q9H209 315 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 AP1M2Q9Y6Q5 423 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CKAP5Q14008 2032 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 FABP12A6NFH5 140 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF878C9JN71 531 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ADM5C9JUS6 153 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ARL6IP5O75915 188 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PRKD3O94806 890 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ZBTB11O95625 1053 aaPredicted RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 RAP2AP10114 183 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 S100PP25815 95 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF792Q3KQV3 632 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 SLC9B2Q86UD5 537 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 STOML3Q8TAV4 291 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 SLC5A7Q9GZV3 580 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 SYT4Q9H2B2 425 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 COPZ2Q9P299 210 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CHD5Q8TDI0 1954 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 I3L521 148 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CXCR6O00574 342 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 E2F3O00716 465 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 SYNGR4O95473 234 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 DGKGP49619 791 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 XKP51811 444 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CSTF1Q05048 431 aaKnown RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 MERTKQ12866 999 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 TARDBPQ13148 414 aaKnown RBP eCLIP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 TPGS2Q68CL5 300 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 BRAT1Q6PJG6 821 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 YIPF7Q8N8F6 280 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ACBD6Q9BR61 282 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 KAT8Q9H7Z6 458 aaKnown RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ABCB9Q9NP78 766 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 YDJCA8MPS7 323 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 AGRPO00253 132 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PBX1P40424 430 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 VITQ6UXI7 678 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ASB9Q96DX5 294 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 P2RY11Q96G91 374 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ORAI3Q9BRQ5 295 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 GLIS2Q9BZE0 524 aaPredicted RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 PNO1Q9NRX1 252 aaKnown RBP8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 OSER1Q9NX31 292 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 SCP2D1Q9UJQ7 156 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 POFUT2Q9Y2G5 429 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 ANKRD63C9JTQ0 380 aa8.69□□□□□ -1.02
SHROOM4-203ENST00000460112 GMFGO60234 142 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms