RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 DGCR6Q14129 220 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 BOP1Q14137 746 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SIM2Q14190 667 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MRPL58Q14197 206 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ELOAQ14241 798 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IHHQ14623 411 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLCA4Q14CN2 919 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAD2L1BPQ15013 274 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 EIF4HQ15056 248 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAPK11Q15759 364 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TBCEQ15813 527 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KCNA10Q16322 511 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NKG7Q16617 165 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CTF1Q16619 201 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPSF6Q16630 551 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CYP2A13Q16696 494 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 HIST2H2ACQ16777 129 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C18orf21Q32NC0 220 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF404Q494X3 552 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PYCR3Q53H96 274 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPIN4Q56A73 249 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PAGE2BQ5JRK9 111 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TOR1AIP1Q5JTV8 583 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPANXN2Q5MJ10 180 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PLEKHS1Q5SXH7 462 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C10orf62Q5T681 223 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GPRC6AQ5T6X5 926 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPTPQ5TA50 214 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 UBE2UQ5VVX9 321 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LIPJQ5W064 366 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FRG2Q64ET8 278 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KDM4DQ6B0I6 523 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KIAA1841Q6NSI8 718 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PNCKQ6P2M8 343 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C17orf99Q6UX52 265 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LINGO4Q6UY18 593 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RNF19BQ6ZMZ0 732 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF621Q6ZSS3 439 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPGS1Q6ZTW0 290 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CBLL1Q75N03 491 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF367Q7RTV3 350 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PAGE2Q7Z2X7 111 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIWIL3Q7Z3Z3 882 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GALNT5Q7Z7M9 940 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF280BQ86YH2 543 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NPAS4Q8IUM7 802 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ARMC8Q8IUR7 673 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC44A2Q8IWA5 706 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC30A8Q8IWU4 369 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MSRB3Q8IXL7 192 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZZZ3Q8IYH5 903 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PHACTR4Q8IZ21 702 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KRTCAP2Q8N6L1 136 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAM86B1Q8N7N1 296 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PNPLA1Q8N8W4 532 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF557Q8N988 423 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 L3MBTL4Q8NA19 623 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C11orf65Q8NCR3 313 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KLHDC9Q8NEP7 349 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR9Q1Q8NGQ5 310 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLHC1Q8NHS4 586 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CDC26Q8NHZ8 85 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PSMA8Q8TAA3 256 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DYNC2LI1Q8TCX1 351 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NETO1Q8TDF5 533 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SH3RF2Q8TEC5 729 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FRS2Q8WU20 508 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAR1Q8WVX9 515 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIK3R3Q92569 461 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PROX1Q92786 737 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TANKQ92844 425 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 HPS1Q92902 700 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLP1Q92989 425 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FKBP10Q96AY3 582 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TIFAQ96CG3 184 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CXorf40BQ96DE9 158 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 YIPF6Q96EC8 236 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPD52L3Q96J77 140 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 HSH2DQ96JZ2 352 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RPL10LQ96L21 214 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FOPNLQ96NB1 174 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 COL21A1Q96P44 957 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSSK3Q96PN8 268 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FRG2BQ96QU4 278 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PANX1Q96RD7 426 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF300Q96RE9 604 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 HBEGFQ99075 208 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PITX2Q99697 317 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PTPN18Q99952 460 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GABARAPL3Q9BY60 117 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ACPTQ9BZG2 426 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C6orf62Q9GZU0 229 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DCSTAMPQ9H295 470 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DSN1Q9H410 356 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ACTL8Q9H568 366 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DUSP21Q9H596 190 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IL1RAPQ9NPH3 570 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NMRK2Q9NPI5 230 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms