RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CDYL2Q8N8U2 506 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ZFAND1Q8TCF1 268 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 DEDD2Q8WXF8 326 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RORBQ92753 470 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RMDN1Q96DB5 314 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 KLHL5Q96PQ7 755 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 INPP5KQ9BT40 448 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 REG4Q9BYZ8 158 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CD244Q9BZW8 370 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RERGLQ9H628 205 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EHMT1Q9H9B1 1298 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF556Q9HAH1 456 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 BFARQ9NZS9 450 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PRRG1O14668 218 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LDB2O43679 373 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NPHS1O60500 1241 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TPPPO94811 219 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CKMT1AP12532 417 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 IMPDH1P20839 514 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 HTR1EP28566 365 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GPC1P35052 558 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 RHAGQ02094 409 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 VEPH1Q14D04 833 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CSRP2Q16527 193 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TWF2Q6IBS0 349 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ERO1BQ86YB8 467 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MIER2Q8N344 545 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 OR13C4Q8NGS5 318 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC2A14Q8TDB8 520 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MAL2Q969L2 176 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MSANTD3Q96H12 275 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LINC00052Q96N35 136 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TIMP4Q99727 224 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PAAF1Q9BRP4 392 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ASAH2Q9NR71 780 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TSR3Q9UJK0 312 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF221Q9UK13 617 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PARP14Q460N5 1801 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 KIAA1671Q9BY89 1806 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC22A2O15244 555 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 OR2B3O76000 313 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 EPOP01588 193 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CYP17A1P05093 508 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MMP2P08253 660 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 INSRRP14616 1297 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 STMN1P16949 149 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 HOXA11P31270 313 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 UGT2B15P54855 530 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LAMTOR4Q0VGL1 99 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NFYCQ13952 458 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LARS2Q15031 903 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LY6KQ17RY6 165 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PRMT9Q6P2P2 845 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LINC00518Q8N0U6 118 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CLYBLQ8N0X4 340 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CELF5Q8N6W0 485 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SIMC1Q8NDZ2 872 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 OR6C4Q8NGE1 309 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GGHQ92820 318 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF566Q969W8 418 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GIMAP5Q96F15 307 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 HPDLQ96IR7 371 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 RIPOR3Q96MK2 946 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GFM1Q96RP9 751 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FEVQ99581 238 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NAT9Q9BTE0 207 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LRRC3Q9BY71 257 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 UPF3AQ9H1J1 476 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 JPH1Q9HDC5 661 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ABCB9Q9NP78 766 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SARS2Q9NP81 518 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SETD4Q9NVD3 440 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 INTS10Q9NVR2 710 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 KLHL8Q9P2G9 620 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MALT1Q9UDY8 824 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LIMD1Q9UGP4 676 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LRBAP50851 2863 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LOC102723532A0A0G2JNH3 316 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 E5RI56 91 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 F8W810 466 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 G3V2T6 193 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 I3L521 148 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CHP2O43745 196 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 HPXP02790 462 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 EIF2S1P05198 315 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 BTCP35070 178 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CTSOP43234 321 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CTBP2P56545 445 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SQLEQ14534 574 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF273Q14593 569 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PAFAH1B3Q15102 231 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 LGALSLQ3ZCW2 172 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF667Q5HYK9 610 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms