RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TRAF3Q13114 568 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PRKAA1Q13131 559 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 STX3Q13277 289 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 CFAP157Q5JU67 520 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PERM1Q5SV97 790 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ATG9BQ674R7 924 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ZNF425Q6IV72 752 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 SPESP1Q6UW49 350 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 SUSD1Q6UWL2 747 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 EFL1Q7Z2Z2 1120 aaKnown RBP10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ZNF761Q86XN6 746 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-206ENST00000454852 TEX9Q8N6V9 391 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 L3MBTL4Q8NA19 623 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 OR2L3Q8NG85 312 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PPP4R1Q8TF05 950 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 DYDC1Q8WWB3 177 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 SLC5A11Q8WWX8 675 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 GRAMD1AQ96CP6 724 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 MED8Q96G25 268 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 C7orf26Q96N11 449 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PAIP2Q9BPZ3 127 aaKnown RBP10.85□□□□□ -0.67
TRAF4-206ENST00000454852 CCDC3Q9BQI4 270 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ABCG4Q9H172 646 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 IPPKQ9H8X2 491 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PELI2Q9HAT8 420 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 THAP1Q9NVV9 213 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 TAC3Q9UHF0 121 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 TSC22D4Q9Y3Q8 395 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 PCDHGA1Q9Y5H4 931 aa10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
TRAF4-206ENST00000454852 ZNF292O60281 2723 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 SRRM3A6NNA2 597 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NTN3O00634 580 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 TM4SF5O14894 197 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 GDF9O60383 454 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PRAMEF4O60810 478 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 DKK1O94907 266 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ESRRBO95718 433 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 EBLN1P0CF75 366 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 CDK4P11802 303 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 MYF5P13349 255 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 UGT2B7P16662 529 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 AMD1P17707 334 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 POLR2CP19387 275 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 CSRP1P21291 193 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 CMPK1P30085 196 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 SLC1A6P48664 564 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ACADVLP49748 655 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 CDH13P55290 713 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 OR1D5P58170 312 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 GUCY1A3Q02108 690 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 FBXO48Q5FWF7 155 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ARL13AQ5H913 290 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 C10orf62Q5T681 223 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PRAMEF9Q5VWM5 478 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 LIPJQ5W064 366 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ATG14Q6ZNE5 492 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 RNF165Q6ZSG1 346 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ZCCHC23Q6ZST2 131 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 FAM129CQ86XR2 697 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PLXDC1Q8IUK5 500 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 CCNYL1Q8N7R7 359 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 OR52B6Q8NGF0 335 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PPP1R14CQ8TAE6 165 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 IFI44Q8TCB0 444 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NETO1Q8TDF5 533 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 LRRC8CQ8TDW0 803 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 AGAP11Q8TF27 550 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 JPH3Q8WXH2 748 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NEIL2Q969S2 332 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ZUFSPQ96AP4 578 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PTCD3Q96EY7 689 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ZDHHC12Q96GR4 267 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 SEC16BQ96JE7 1060 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NSUN5Q96P11 429 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 SORT1Q99523 831 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 EFCAB11Q9BUY7 163 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 LRRN3Q9H3W5 708 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NT5DC2Q9H857 520 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 NOL11Q9H8H0 719 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 EML4Q9HC35 981 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ENAMQ9NRM1 1142 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 C1GALT1Q9NS00 363 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 TMEM184CQ9NVA4 438 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 TRPS1Q9UHF7 1281 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ZNF225Q9UK10 706 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 DYRK1BQ9Y463 629 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 ANGPTL3Q9Y5C1 460 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 FRYLO94915 3013 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
TRAF4-206ENST00000454852 PCM1Q15154 2024 aa10.84□□□□□ -0.67
TRAF4-206ENST00000454852 KCNE1BA0A087WTH5 132 aa10.83□□□□□ -0.68
TRAF4-206ENST00000454852 IGKV1-8A0A0C4DH67 115 aa10.83□□□□□ -0.68
TRAF4-206ENST00000454852 A0A0J9YY10 115 aa10.83□□□□□ -0.68
TRAF4-206ENST00000454852 A0A1W2PQM1 296 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms