RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SAT1P21673 171 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 RPA3P35244 121 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 RAB10P61026 200 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 CXADRP78310 365 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 ABATP80404 500 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 RELAQ04206 551 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 PRDX1Q06830 199 aaKnown RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 AGTRAPQ6RW13 159 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 DSELQ8IZU8 1212 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 OR56A3Q8NH54 315 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 FBXL8Q96CD0 374 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 SLC45A3Q96JT2 553 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 UBXN10Q96LJ8 280 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 PLCD4Q9BRC7 762 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 MRPS30Q9NP92 439 aaKnown RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 CCDC177Q9NQR7 707 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 OARD1Q9Y530 152 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 SPTBP11277 2137 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 FITM1A5D6W6 292 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 C21orf140B9A014 251 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CDC7O00311 574 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 ZSCAN9O15535 394 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-205ENST00000454542 ACSL3O95573 720 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 NTRK1P04629 796 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SLC35E2BP0CK96 405 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CD1DP15813 335 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 F8A1P23610 371 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CCND1P24385 295 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 MAGEA12P43365 314 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SLMAPQ14BN4 828 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CRTC2Q53ET0 693 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-205ENST00000454542 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
HDAC4-205ENST00000454542 PRAMEF13Q5VWM6 474 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 RHBDD2Q6NTF9 364 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 FAM198BQ6UWH4 519 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CCDC81Q6ZN84 652 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CMC1Q7Z7K0 106 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 KLHDC8AQ8IYD2 350 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SLC44A1Q8WWI5 657 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 RNF31Q96EP0 1072 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 DPH7Q9BTV6 452 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 EFHD1Q9BUP0 239 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 ACAT2Q9BWD1 397 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 PCBD2Q9H0N5 130 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SERTAD3Q9UJW9 196 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 CROTQ9UKG9 612 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 SRPK3Q9UPE1 567 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 AP1M2Q9Y6Q5 423 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 PCM1Q15154 2024 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
HDAC4-205ENST00000454542 MGAQ8IWI9 3026 aa13.58□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF749O43361 778 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 OR2B3O76000 313 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 CAPN1P07384 714 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 HBQ1P09105 142 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 MYBL2P10244 700 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 SLC26A3P40879 764 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 TLDC1Q6P9B6 456 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 MCATQ8IVS2 390 aaKnown RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 GPR135Q8IZ08 494 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 ATL1Q8WXF7 558 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 KIAA1143Q96AT1 154 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 GBP5Q96PP8 586 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 ZFYVE21Q9BQ24 234 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 SPRTNQ9H040 489 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 EPB41L4BQ9H329 900 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 AKIRIN1Q9H9L7 192 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 GPN2Q9H9Y4 310 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 CUEDC1Q9NWM3 386 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-205ENST00000454542 ARL15Q9NXU5 204 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 PADI1Q9ULC6 663 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 SH2B3Q9UQQ2 575 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 BSNQ9UPA5 3926 aa13.58□□□□□ -0.24
HDAC4-205ENST00000454542 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 FAM208BQ5VWN6 2430 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 ESPNB1AK53 854 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 MEN1O00255 615 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 CCDC166P0CW27 439 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 EZRP15311 586 aaKnown RBP13.57□□□□□ -0.24
HDAC4-205ENST00000454542 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
HDAC4-205ENST00000454542 CRABP2P29373 138 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms