RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GMPSP49915 693 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PLCD1P51178 756 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 BCAP31P51572 246 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 VAV2P52735 878 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SELENOVP59797 346 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 HNRNPKP61978 463 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PPP2R2BQ00005 443 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 EGR4Q05215 589 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RASGEF1BQ0VAM2 473 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 CYLC2Q14093 348 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SHBQ15464 509 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TBR1Q16650 682 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 LY6KQ17RY6 165 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PDLIM3Q53GG5 364 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF311Q5JNZ3 666 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATL3Q6DD88 541 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PTRHD1Q6GMV3 140 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 LCTLQ6UWM7 567 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC39A5Q6ZMH5 540 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRILQ7L0X0 811 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 EIF3MQ7L2H7 374 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PLEKHH3Q7Z736 793 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 NEK8Q86SG6 692 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZDHHC17Q8IUH5 632 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 IZUMO1Q8IYV9 350 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PYROXD2Q8N2H3 581 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 GPR137CQ8N3F9 429 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZCCHC9Q8N567 271 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 AMER3Q8N944 861 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRPV3Q8NET8 790 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 CDC26Q8NHZ8 85 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 CD300LFQ8TDQ1 290 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 MBD6Q96DN6 1003 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ERLEC1Q96DZ1 483 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 STAMBPL1Q96FJ0 436 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 C4orf36Q96KX1 117 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPATA33Q96N06 139 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SIN3AQ96ST3 1273 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 OLFM1Q99784 485 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TSG101Q99816 390 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATG101Q9BSB4 218 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TKTL2Q9H0I9 626 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 DNTTIP1Q9H147 329 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAD21L1Q9H4I0 556 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 CDCP1Q9H5V8 836 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 AUNIPQ9H7T9 357 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 COG4Q9H9E3 785 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PCDH9Q9HC56 1237 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 HHATLQ9HCP6 504 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 BPIFA1Q9NP55 256 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 IL26Q9NPH9 171 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 MKKSQ9NPJ1 570 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TFCP2L1Q9NZI6 479 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 NLKQ9UBE8 527 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 WNT16Q9UBV4 365 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SERGEFQ9UGK8 458 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 STAP1Q9ULZ2 295 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 KANK1Q14678 1352 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPATA31A1Q5TZJ5 1347 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPATA31A5Q5VU36 1347 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPATA31A7Q8IWB4 1347 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 A0A0U1RRA0 63 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCDC195A0A1B0GUA6 201 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 DUXAA6NLW8 204 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR2AG2A6NM03 316 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 B5MCH6 92 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 H0YIG0 161 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC28A1O00337 649 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 AP5Z1O43299 807 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GRID2O43424 1007 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GMNNO75496 209 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 CBR3O75828 277 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 VNN1O95497 513 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ACSL3O95573 720 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GAS8O95995 478 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MBP02144 154 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ICAM1P05362 532 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MMP10P09238 476 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ALDOCP09972 364 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD34CP0C6C1 535 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 NR2F6P10588 404 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 IGFBP2P18065 325 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MSR1P21757 451 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 FBLP22087 321 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TYK2P29597 1187 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GRIA1P42261 906 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PRCPP42785 496 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 IER3P46695 156 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC1A6P48664 564 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 RGS7P49802 495 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MEOX1P50221 254 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 YWHAEP62258 255 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PLP2Q04941 152 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms