RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FAM110BQ8TC76 370 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 CANT1Q8WVQ1 401 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 BTN2A2Q8WVV5 523 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ELMO1Q92556 727 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 TOE1Q96GM8 510 aaKnown RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 EFHD1Q9BUP0 239 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 DUSP15Q9H1R2 295 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 ALG2Q9H553 416 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 NANOGQ9H9S0 305 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 FBXL12Q9NXK8 326 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 EGFL7Q9UHF1 273 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 EIF3LQ9Y262 564 aaKnown RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 NEUROG3Q9Y4Z2 214 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 DNAH14Q0VDD8 3507 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 TRPM6Q9BX84 2022 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SPINT1O43278 529 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SLCO2B1O94956 709 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ADH1BP00325 375 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 IGLV3-19P01714 112 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 HIST1H2AGP0C0S8 130 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 HIST1H2ADP20671 130 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 CYP2A7P20853 494 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 C5AR1P21730 350 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 XPAP23025 273 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 CD6P30203 668 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ACSL1P33121 698 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 DRD3P35462 400 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 GNPDA1P46926 289 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 AP1S2P56377 157 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 PDK3Q15120 406 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ZNF284Q2VY69 593 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SGO1Q5FBB7 561 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 LDLRAP1Q5SW96 308 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 NEK5Q6P3R8 708 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 UGT2A3Q6UWM9 527 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SPPL2CQ8IUH8 684 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 HID1Q8IV36 788 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 TMEFF1Q8IYR6 380 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 HDDC3Q8N4P3 179 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 BEND7Q8N7W2 519 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 GANCQ8TET4 914 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 NUDT8Q8WV74 236 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SKA2Q8WVK7 121 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 HIST1H2AHQ96KK5 128 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 TMEM74Q96NL1 305 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 HIST1H2AJQ99878 128 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 H2AFJQ9BTM1 129 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ACTR8Q9H981 624 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 LRTM1Q9HBL6 345 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 WSB2Q9NYS7 404 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 ITM2BQ9Y287 266 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 SNX13Q9Y5W8 968 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 PIEZO1Q92508 2521 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 TCRBV5S2A0A599 114 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 KRT87PA6NCN2 255 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 TMEM202A6NGA9 273 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PROB1E7EW31 1015 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 KPNA3O00505 521 aaPredicted RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 TXNDC9O14530 226 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 MAP3K13O43283 966 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 KRT6AP02538 564 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PRNPP04156 253 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 KRT6BP04259 564 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ZCCHC18P0CG32 403 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 CASP2P42575 452 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 KRT6CP48668 564 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 HSPA13P48723 471 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 DGKQP52824 942 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 RPL6Q02878 288 aaKnown RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 CNTN1Q12860 1018 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PTGR1Q14914 329 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PTCHD3Q3KNS1 767 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 MTX3Q5HYI7 312 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ERAP2Q6P179 960 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ERMP1Q7Z2K6 904 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ADGRG5Q8IZF4 528 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 RASGEF1AQ8N9B8 481 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 L3MBTL4Q8NA19 623 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 TMIEQ8NEW7 156 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ASZ1Q8WWH4 475 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 GLYATL1Q969I3 302 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ARRDC3Q96B67 414 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ZC3H10Q96K80 434 aaKnown RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 KCTD14Q9BQ13 255 aaPredicted RBP10.39□□□□□ -0.75
PKP4-206ENST00000452162 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 SEMA6AQ9H2E6 1030 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 C1orf109Q9NX04 203 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PDP2Q9P2J9 529 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 SCML1Q9UN30 329 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 ZNF292O60281 2723 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 OR2AG2A6NM03 316 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 C1QTNF3-AMACRE9PGA6 284 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 H0YJX3 145 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 PSMD11O00231 422 aa10.39□□□□□ -0.75
PKP4-206ENST00000452162 QSOX1O00391 747 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms