RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 CDK16Q00536 496 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 HIF1AQ16665 826 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 TYSND1Q2T9J0 566 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 FBXO42Q6P3S6 717 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 TCF12Q99081 682 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 MESP1Q9BRJ9 268 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 FAM169AQ9Y6X4 670 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 HEATR5BQ9P2D3 2071 aa25.92■■□□□ 1.74
USP42-204ENST00000451154 VSTM2BA6NLU5 285 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 VPS41P49754 854 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 GBX1Q14549 363 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 RBBP7Q16576 425 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 ACSBG2Q5FVE4 666 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 PRSS58Q8IYP2 241 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 OR9A1PQ8NGU1 263 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 TRIM56Q9BRZ2 755 aaKnown RBP25.91■■□□□ 1.74
USP42-204ENST00000451154 DPH7Q9BTV6 452 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 ZNF304Q9HCX3 659 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 SPATA7Q9P0W8 599 aa25.91■■□□□ 1.74
USP42-204ENST00000451154 NXT1Q9UKK6 140 aaKnown RBP25.91■■□□□ 1.74
USP42-204ENST00000451154 A1L4Q6 167 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 H3BMM5 538 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 PFDN6O15212 129 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 ESR1P03372 595 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 ANKRD20A4Q4UJ75 823 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.9■■□□□ 1.74
USP42-204ENST00000451154 RNF187Q5TA31 235 aaPredicted RBP25.9■■□□□ 1.74
USP42-204ENST00000451154 AGAP7PQ5VUJ5 663 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 SUSD1Q6UWL2 747 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 PRELID2Q8N945 189 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 AGAP4Q96P64 663 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 SEMA3GQ9NS98 782 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 NTNG1Q9Y2I2 539 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 PCDHGA10Q9Y5H3 936 aa25.9■■□□□ 1.74
USP42-204ENST00000451154 ARHGEF33A8MVX0 844 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 CCDC175P0C221 793 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 CMPK1P30085 196 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 KCNJ11Q14654 390 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 KLHL38Q2WGJ6 581 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 KIAA0930Q6ICG6 404 aaPredicted RBP25.89■■□□□ 1.74
USP42-204ENST00000451154 NEPROQ6NW34 567 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 CASC4Q6P4E1 433 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 ZNF662Q6ZS27 426 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 CENPUQ71F23 418 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 RNF44Q7L0R7 432 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 SPNS2Q8IVW8 549 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 OR11G2Q8NGC1 345 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 HOMER3Q9NSC5 361 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 SVILO95425 2214 aa25.89■■□□□ 1.74
USP42-204ENST00000451154 POLEQ07864 2286 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 CACNA1DQ01668 2161 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 OR2A25A4D2G3 310 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 ANKUB1A6NFN9 424 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 H0YGG7 62 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 DDAH2O95865 285 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 F7P08709 466 aaPredicted RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 ATP5DP30049 168 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 ADARP55265 1226 aaKnown RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 ARF3P61204 181 aaPredicted RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 OCA2Q04671 838 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 KLC1Q07866 573 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 Q0VFX4 171 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 GPS1Q13098 491 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 TSTA3Q13630 321 aaPredicted RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 TUBB8Q3ZCM7 444 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 IRAK1BP1Q5VVH5 260 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 ANKRD22Q5VYY1 191 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 CAND1Q86VP6 1230 aaKnown RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 CILP2Q8IUL8 1156 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 DNAJB14Q8TBM8 379 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 STT3BQ8TCJ2 826 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 THOC3Q96J01 351 aaKnown RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 ZFYVE21Q9BQ24 234 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 WDR77Q9BQA1 342 aaPredicted RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 CRB3Q9BUF7 120 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 LHPPQ9H008 270 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 ERRFI1Q9UJM3 462 aaPredicted RBP25.88■■□□□ 1.73
USP42-204ENST00000451154 CRYBG3Q68DQ2 2970 aa25.88■■□□□ 1.73
USP42-204ENST00000451154 DOPEY1Q5JWR5 2465 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 ZGLP1P0C6A0 271 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 PKMP14618 531 aaKnown RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 OGNP20774 298 aaKnown RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 SARNPP82979 210 aaKnown RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 PRMT9Q6P2P2 845 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 IGFL2Q6UWQ7 119 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 TRIM58Q8NG06 486 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 SMPDL3AQ92484 453 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 MIEF2Q96C03 454 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 C10orf90Q96M02 699 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 PKP4Q99569 1192 aa25.87■■□□□ 1.73
USP42-204ENST00000451154 BARD1Q99728 777 aaKnown RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 MRPS30Q9NP92 439 aaKnown RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 ZNF282Q9UDV7 671 aaPredicted RBP25.87■■□□□ 1.73
USP42-204ENST00000451154 ITPR2Q14571 2701 aa25.86■■□□□ 1.73
USP42-204ENST00000451154 E5RI56 91 aa25.86■■□□□ 1.73
USP42-204ENST00000451154 PSIP1O75475 530 aaKnown RBP25.86■■□□□ 1.73
USP42-204ENST00000451154 ERVK-10P10266 1014 aa25.86■■□□□ 1.73
USP42-204ENST00000451154 ERGP11308 486 aa25.86■■□□□ 1.73
USP42-204ENST00000451154 RPA3P35244 121 aaPredicted RBP25.86■■□□□ 1.73
USP42-204ENST00000451154 MUM1Q2TAK8 710 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms