RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 LINC00862A6NCI5 91 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC22A3O75751 556 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CYBBP04839 570 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 OGNP20774 298 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CAPN3P20807 821 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 GPX3P22352 226 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 BRAT1Q6PJG6 821 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 PTRH1Q86Y79 214 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 FAM9CQ8IZT9 166 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 NKAPQ8N5F7 415 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ITFG1Q8TB96 612 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 NCLNQ969V3 563 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 TREX1Q9NSU2 369 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 CCDC182A6NF36 153 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 LCKP06239 509 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ANXA6P08133 673 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ACADMP11310 421 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC35A2P78381 396 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 RIMKLAQ8IXN7 391 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR8H3Q8N146 312 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SPATA6LQ8N4H0 392 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF566Q969W8 418 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 PPA2Q9H2U2 334 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ARNT2Q9HBZ2 717 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SDR39U1Q9NRG7 319 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TAS2R13Q9NYV9 303 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 AASSQ9UDR5 926 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 A0A1W2PRG6 482 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 IRAK2O43187 625 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 HS6ST1O60243 411 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 PAHP00439 452 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 UBE3AQ05086 875 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 MAD2L1Q13257 205 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 DDR2Q16832 855 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 UGT3A2Q3SY77 523 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 FNDC5Q8NAU1 212 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC38A4Q969I6 547 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TMEM125Q96AQ2 219 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TBATAQ96M53 351 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC35C2Q9NQQ7 365 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 OSER1Q9NX31 292 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF175Q9Y473 711 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 FAM234BA2RU67 622 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 BTN3A3O00478 584 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 CYP7B1O75881 506 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 RAP2AP10114 183 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 DAB2P98082 770 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 IL18R1Q13478 541 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 OLIG2Q13516 323 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF460Q14592 562 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 AAK1Q2M2I8 961 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 TYW3Q6IPR3 259 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 ADHFE1Q8IWW8 467 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 PLPP6Q8IY26 295 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 PYCR2Q96C36 320 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 GSTO2Q9H4Y5 243 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
SYNGAP1-204ENST00000449372 A0A0U1RQS6 177 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 FAM92AA1XBS5 289 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RGS10O43665 173 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 TNFRSF21O75509 655 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RPL17P18621 184 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RYKP34925 604 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SULT1C3Q6IMI6 304 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ARHGAP12Q8IWW6 846 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ITCHQ96J02 903 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 USP22Q9UPT9 525 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 LOC100506127A0A0U1RQW1 187 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 NEMP2A6NFY4 417 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 PRSS23O95084 383 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 PGRP06401 933 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms