RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CYP2A13Q16696 494 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 GLE1Q53GS7 698 aaKnown RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 CEP128Q6ZU80 1094 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 C3orf62Q6ZUJ4 267 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FBXO15Q8NCQ5 510 aaPredicted RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 PPFIBP2Q8ND30 876 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 OR1L3Q8NH93 324 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 HMGCLL1Q8TB92 370 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 ASB11Q8WXH4 323 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 SMPDL3AQ92484 453 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 SEC14L1Q92503 715 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FCRL4Q96PJ5 515 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 PSMG3-AS1Q96PY0 264 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 ACAT2Q9BWD1 397 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FAM129AQ9BZQ8 928 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FAM60AQ9NP50 221 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 ZNF71Q9NQZ8 489 aaPredicted RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 DMGDHQ9UI17 866 aaKnown RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 MAN2B2Q9Y2E5 1009 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 VWA7Q9Y334 891 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FKBP9O95302 570 aa14□□□□□ -0.17
USP39-206ENST00000448971 SLC16A8O95907 504 aa14□□□□□ -0.17
USP39-206ENST00000448971 CCNYL3P0C7X3 344 aa14□□□□□ -0.17
USP39-206ENST00000448971 MSL3P1P0C860 447 aa14□□□□□ -0.17
USP39-206ENST00000448971 ERGP11308 486 aa14□□□□□ -0.17
USP39-206ENST00000448971 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
USP39-206ENST00000448971 CMPK1P30085 196 aa14□□□□□ -0.17
USP39-206ENST00000448971 HSD17B2P37059 387 aa14□□□□□ -0.17
USP39-206ENST00000448971 GP5P40197 560 aa14□□□□□ -0.17
USP39-206ENST00000448971 STAT5AP42229 794 aa14□□□□□ -0.17
USP39-206ENST00000448971 PGGT1BP53609 377 aa14□□□□□ -0.17
USP39-206ENST00000448971 GPX6P59796 221 aa14□□□□□ -0.17
USP39-206ENST00000448971 TIAL1Q01085 375 aaKnown RBP eCLIP14□□□□□ -0.17
USP39-206ENST00000448971 ILF2Q12905 390 aaKnown RBP14□□□□□ -0.17
USP39-206ENST00000448971 ZNF460Q14592 562 aa14□□□□□ -0.17
USP39-206ENST00000448971 ARHGAP19Q14CB8 494 aa14□□□□□ -0.17
USP39-206ENST00000448971 NAA25Q14CX7 972 aa14□□□□□ -0.17
USP39-206ENST00000448971 THEMIS2Q5TEJ8 643 aa14□□□□□ -0.17
USP39-206ENST00000448971 SUSD1Q6UWL2 747 aa14□□□□□ -0.17
USP39-206ENST00000448971 CYHR1Q6ZMK1 362 aa14□□□□□ -0.17
USP39-206ENST00000448971 OR2L3Q8NG85 312 aa14□□□□□ -0.17
USP39-206ENST00000448971 C9orf43Q8TAL5 461 aaPredicted RBP14□□□□□ -0.17
USP39-206ENST00000448971 MCOLN3Q8TDD5 553 aa14□□□□□ -0.17
USP39-206ENST00000448971 IFT81Q8WYA0 676 aa14□□□□□ -0.17
USP39-206ENST00000448971 CLIP3Q96DZ5 547 aa14□□□□□ -0.17
USP39-206ENST00000448971 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
USP39-206ENST00000448971 FMO2Q99518 471 aa14□□□□□ -0.17
USP39-206ENST00000448971 CPNE1Q99829 537 aa14□□□□□ -0.17
USP39-206ENST00000448971 EFHD1Q9BUP0 239 aa14□□□□□ -0.17
USP39-206ENST00000448971 TWSG1Q9GZX9 223 aa14□□□□□ -0.17
USP39-206ENST00000448971 TAC3Q9UHF0 121 aa14□□□□□ -0.17
USP39-206ENST00000448971 SERTAD3Q9UJW9 196 aa14□□□□□ -0.17
USP39-206ENST00000448971 ADAMTS6Q9UKP5 1117 aa14□□□□□ -0.17
USP39-206ENST00000448971 UNC79Q9P2D8 2635 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PRRC2CQ9Y520 2896 aaKnown RBP13.99□□□□□ -0.17
USP39-206ENST00000448971 FAM159BA6NKW6 160 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 CXorf49A8MYA2 514 aaPredicted RBP13.99□□□□□ -0.17
USP39-206ENST00000448971 GFYI3L273 518 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 OR2B3O76000 313 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 CCNDBP1O95273 360 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 HIST1H2AGP0C0S8 130 aaPredicted RBP13.99□□□□□ -0.17
USP39-206ENST00000448971 HIST1H2ADP20671 130 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 IMPA1P29218 277 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PHBP35232 272 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 DLSTP36957 453 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 CDC20Q12834 499 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 SLMAPQ14BN4 828 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 KBTBD12Q3ZCT8 623 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PRAMEF17Q5VTA0 474 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PPM1NQ8N819 430 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 FBF1Q8TES7 1133 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 ZNF480Q8WV37 535 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 HIST1H2AHQ96KK5 128 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 RBBP8Q99708 897 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 HIST1H2AJQ99878 128 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 H2AFJQ9BTM1 129 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 ACTR5Q9H9F9 607 aaPredicted RBP13.99□□□□□ -0.17
USP39-206ENST00000448971 LRRC4CQ9HCJ2 640 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 GPAMQ9HCL2 828 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 LHX9Q9NQ69 397 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 CCDC177Q9NQR7 707 aaPredicted RBP13.99□□□□□ -0.17
USP39-206ENST00000448971 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PLCL2Q9UPR0 1127 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 PCDHB3Q9Y5E6 796 aa13.99□□□□□ -0.17
USP39-206ENST00000448971 A0A1W2PPV9 198 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 SLC16A5O15375 505 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 TSPAN12O95859 305 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 PRKAR1AP10644 381 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 TAS2R39P59534 338 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 TBPL1P62380 186 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 GPS2Q13227 327 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 NAB1Q13506 487 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.173e-8■■□□□ 13.7
USP39-206ENST00000448971 CRTC2Q53ET0 693 aaPredicted RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 ZC3H12BQ5HYM0 836 aaKnown RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 FIGLAQ6QHK4 219 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 MBOAT1Q6ZNC8 495 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 ADCK2Q7Z695 626 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms