RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
GTF3C3-206ENST00000448539 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 RAD1O60671 282 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 SCRG1O75711 98 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 WISP3O95389 354 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 MT-ND3P03897 115 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 S100BP04271 92 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 SLC35E2BP0CK96 405 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 CD1DP15813 335 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 SLC26A3P40879 764 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 TBPL1P62380 186 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 VSNL1P62760 191 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 CDKL1Q00532 357 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 PRDX1Q06830 199 aaKnown RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 ICE2Q659A1 982 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 C6orf15Q6UXA7 325 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 ADCK2Q7Z695 626 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 GPSM1Q86YR5 675 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 NLGN4XQ8N0W4 816 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 DNAJC22Q8N4W6 341 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 IL22RA1Q8N6P7 574 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 NLGN4YQ8NFZ3 816 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 UBXN10Q96LJ8 280 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 VPS11Q9H270 941 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 ANKMY1Q9P2S6 941 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 IKZF3Q9UKT9 509 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 RNF112Q9ULX5 631 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 SNX7Q9UNH6 387 aa13.48□□□□□ -0.25
GTF3C3-206ENST00000448539 A0A087WV48 116 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 A0A096LPK6 155 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 E7EQ34 232 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 CPNE3O75131 537 aaKnown RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 OR2B3O76000 313 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 C2P06681 752 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 CCNYL3P0C7X3 344 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 HRH2P25021 359 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 HNMTP50135 292 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 CLN3Q13286 438 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 PPP1R3AQ16821 1122 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 COL28A1Q2UY09 1125 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 MANEAQ5SRI9 462 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 WDR93Q6P2C0 686 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 KLC3Q6P597 504 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 C17orf64Q86WR6 236 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 MCATQ8IVS2 390 aaKnown RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 SPACA3Q8IXA5 215 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 LRRC56Q8IYG6 542 aaPredicted RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 ESX1Q8N693 406 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 OR1L3Q8NH93 324 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 DCAKDQ8WVC6 231 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 RNF31Q96EP0 1072 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 TSNARE1Q96NA8 513 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 HAUS8Q9BT25 410 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 EURLQ9NYK6 297 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 PILRAQ9UKJ1 303 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 TMEM184BQ9Y519 407 aaPredicted RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 KLK4Q9Y5K2 254 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 LOC400499M0QZD8 3231 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 FAM208BQ5VWN6 2430 aa13.47□□□□□ -0.25
GTF3C3-206ENST00000448539 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 HMX2A2RU54 273 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 NCF1BA6NI72 391 aaPredicted RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 NCF1CA8MVU1 366 aaPredicted RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TRIM49D1C9J1S8 452 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TIAF1O95411 115 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 NTRK1P04629 796 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 HBQ1P09105 142 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 NCF1P14598 390 aaPredicted RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 ZNF28P17035 718 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TFEBP19484 476 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 UCNP55089 124 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 MAP7Q14244 749 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TGFBIQ15582 683 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TGIF1Q15583 401 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 LCTLQ6UWM7 567 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 DTX1Q86Y01 620 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 TCAIMQ8N3R3 496 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 GALNT6Q8NCL4 622 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 OR56A3Q8NH54 315 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 KCTD4Q8WVF5 259 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 NKD1Q969G9 470 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 KIAA1143Q96AT1 154 aaPredicted RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 PYCR2Q96C36 320 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms