RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SMARCB1Q12824 385 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM171A1Q5VUB5 890 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GPRIN3Q6ZVF9 776 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZSWIM9Q86XI8 627 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ATPAF2Q8N5M1 289 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 OR56A4Q8NGH8 313 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 VANGL1Q8TAA9 524 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MRGPRX2Q96LB1 330 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TSGA13Q96PP4 275 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 BARHL1Q9BZE3 327 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TMEM39BQ9GZU3 492 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PAK6Q9NQU5 681 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TAS2R16Q9NYV7 291 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC25A37Q9NYZ2 338 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 OR12D3Q9UGF7 316 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TRAV19A0A0A6YYK7 116 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MYL12BO14950 172 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GPX5O75715 221 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MYL12AP19105 171 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 FDXRP22570 491 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 CPT1AP50416 773 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZMYND11Q15326 602 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 AP5B1Q2VPB7 878 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TEX261Q6UWH6 196 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 UNC93AQ86WB7 457 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TIGD4Q8IY51 512 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TRAPPC12Q8WVT3 735 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 NTAN1Q96AB6 310 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 DIRAS2Q96HU8 199 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 HRASLS5Q96KN8 279 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 OR5M11Q96RB7 305 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RAD9AQ99638 391 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TRAF4Q9BUZ4 470 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 REEP1Q9H902 201 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 QTRT2Q9H974 415 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RBM22Q9NW64 420 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 U3KQ87 197 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SCAMP3O14828 347 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KERAO60938 352 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ECI2O75521 394 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RPS17P08708 135 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IL1RNP18510 177 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MAGEA2P43356 314 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 AANATQ16613 207 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RUNDC3AQ59EK9 446 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SHEQ5VZ18 495 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KIAA1324Q6UXG2 1013 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF782Q6ZMW2 699 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 CCDC149Q6ZUS6 474 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GLCCI1Q86VQ1 547 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KLHDC8BQ8IXV7 354 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GDPD1Q8N9F7 314 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZBTB44Q8NCP5 570 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 METTL6Q8TCB7 284 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PCNPQ8WW12 178 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SPNS1Q9H2V7 528 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TMEM245Q9H330 911 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IL1RAPQ9NPH3 570 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RAD18Q9NS91 495 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 DDIT4Q9NX09 232 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ELF5Q9UKW6 265 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SAMD4AQ9UPU9 718 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MAN2B2Q9Y2E5 1009 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 A0A1W2PRG6 482 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 PRR23AA6NEV1 266 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 PLA2G10O15496 165 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 LMO2P25791 158 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 GPC1P35052 558 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 MAP2K3P46734 347 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 RPL34P49207 117 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ARSDP51689 593 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 CLCN3P51790 818 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 WNT3AP56704 352 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 RAB25P57735 213 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 RRAS2P62070 204 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TSNQ15631 228 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FLYWCH1Q4VC44 716 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF367Q7RTV3 350 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 MSRB3Q8IXL7 192 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 LPCAT1Q8NF37 534 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 CLHC1Q8NHS4 586 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 C1orf74Q96LT6 269 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 PRMT7Q9NVM4 692 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FBXW11Q9UKB1 542 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 MAPRE3Q9UPY8 281 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TNPO3Q9Y5L0 923 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 DICER1Q9UPY3 1922 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FABP3P05413 133 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC10A3P09131 477 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC2A4P14672 509 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 CHMP24386 653 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 CCNCP24863 283 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TGM4P49221 684 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 AIF1P55008 147 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms