RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SYPL2Q5VXT5 272 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FUT10Q6P4F1 479 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SPERTQ8NA61 448 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CLEC4DQ8WXI8 215 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FUBP3Q96I24 572 aaKnown RBP eCLIP7.6□□□□□ -1.199e-9■■■□□ 15.5
NEDD9-204ENST00000448183 ZNF514Q96K75 400 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FRMD6Q96NE9 622 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 OSBPL2Q9H1P3 480 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC32A1Q9H598 525 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ITM2CQ9NQX7 267 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 RNF6Q9Y252 685 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TRBV23OR9-2A0A075B6M9 112 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TRBC2A0A5B9 178 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CREG1O75629 220 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 APODP05090 189 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 DLDP09622 509 aaKnown RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 AVPR1BP47901 424 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CDKL1Q00532 357 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ILF3Q12906 894 aaKnown RBP eCLIP7.6□□□□□ -1.193e-10■■■□□ 16.4
NEDD9-204ENST00000448183 MEP1AQ16819 746 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CRY2Q49AN0 593 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MINDY4Q4G0A6 757 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ARL9Q6T311 187 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PTF1AQ7RTS3 328 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 NUDT13Q86X67 352 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC37A3Q8NCC5 494 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ZCCHC10Q8TBK6 192 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ZUFSPQ96AP4 578 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PYCR2Q96C36 320 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PYURFQ96I23 114 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FBXL20Q96IG2 436 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PRICKLE1Q96MT3 831 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PRRG4Q9BZD6 226 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ADAP2Q9NPF8 381 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 P2RX2Q9UBL9 471 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CPQQ9Y646 472 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ALG5Q9Y673 324 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PLIN4Q96Q06 1357 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ARL5CA6NH57 179 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 LRRC72A6NJI9 287 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RNASEH2AO75792 299 aaKnown RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 GABBR2O75899 941 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CSNK2A2P19784 350 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FUT4P22083 530 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 GLDCP23378 1020 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 MPIP34949 423 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CASP9P55211 416 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RASGEF1BQ0VAM2 473 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 DUOXA1Q1HG43 343 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ANKDD1AQ495B1 522 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 SPIN4Q56A73 249 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CLEC12AQ5QGZ9 265 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PSRC1Q6PGN9 363 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 LRRC70Q7Z2Q7 622 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 GPR151Q8TDV0 419 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 NCSTNQ92542 709 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RDH12Q96NR8 316 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PKP4Q99569 1192 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FUZQ9BT04 418 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FNIP2Q9P278 1114 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TMED5Q9Y3A6 229 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 HSPB11Q9Y547 144 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TLX3O43711 291 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CDRT1O95170 752 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RENP00797 406 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 NPPAP01160 153 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PCCBP05166 539 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 NCBP2P52298 156 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 UFM1P61960 85 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CDK6Q00534 326 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PCLAFQ15004 111 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FAM110CQ1W6H9 321 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 XKR4Q5GH76 650 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RABL3Q5HYI8 236 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PRPF38BQ5VTL8 546 aaKnown RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 CLEC20AQ6ZU45 233 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 NUP54Q7Z3B4 507 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ADGRD2Q7Z7M1 963 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RELL1Q8IUW5 271 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 EGFL6Q8IUX8 553 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TMIEQ8NEW7 156 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ATP6V1C2Q8NEY4 427 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 C7orf43Q8WVR3 580 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 SEC14L1Q92503 715 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PHOX2BQ99453 314 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 UCK2Q9BZX2 261 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 PIGVQ9NUD9 493 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 SIRPGQ9P1W8 387 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TLR6Q9Y2C9 796 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 IGKV6D-41A0A0C4DH26 115 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF182P17025 639 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 HK1P19367 917 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 STOMP27105 288 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 MAP3K8P41279 467 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ARSFP54793 590 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 SLBPQ14493 270 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 KIAA1614Q5VZ46 1190 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms