RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 AKR1C8PQ5T2L2 129 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 N4BP2L1Q5TBK1 243 aaPredicted RBP2.86□□□□□ -1.95
CHD9-203ENST00000447540 KIAA1614Q5VZ46 1190 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 RTL4Q6ZR62 310 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 PTRH1Q86Y79 214 aaKnown RBP2.86□□□□□ -1.95
CHD9-203ENST00000447540 PNMA1Q8ND90 353 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 AKR7LQ8NHP1 331 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 CEP76Q8TAP6 659 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 SCARB1Q8WTV0 552 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 SMARCD1Q96GM5 515 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 P2RY13Q9BPV8 354 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 MTG2Q9H4K7 406 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 ANKRD19PQ9H560 264 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 LYRM2Q9NU23 88 aaPredicted RBP2.86□□□□□ -1.95
CHD9-203ENST00000447540 OAZ3Q9UMX2 235 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 FARSAQ9Y285 508 aaKnown RBP2.86□□□□□ -1.95
CHD9-203ENST00000447540 RNF11Q9Y3C5 154 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 KCTD3Q9Y597 815 aa2.86□□□□□ -1.95
CHD9-203ENST00000447540 AFDNP55196 1824 aaKnown RBP2.86□□□□□ -1.95
CHD9-203ENST00000447540 MMP20O60882 483 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 MT-ND2P03891 347 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 GKN3PP0CG01 181 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TFE3P19532 575 aaPredicted RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 LHCGRP22888 699 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 YWHAHQ04917 246 aaPredicted RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 CNTN1Q12860 1018 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 NME3Q13232 169 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 FAM189A2Q15884 450 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 AP5B1Q2VPB7 878 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 GPR33Q49SQ1 333 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 AWAT2Q6E213 333 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 NAPEPLDQ6IQ20 393 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TATDN1Q6P1N9 297 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TFAP2EQ6VUC0 442 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 CERS6Q6ZMG9 384 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 PHF13Q86YI8 300 aaPredicted RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 TMEM174Q8WUU8 243 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TRIM43Q96BQ3 446 aaPredicted RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZBTB8AQ96BR9 441 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 HEXIM2Q96MH2 286 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 FAM129BQ96TA1 746 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TAS2R3Q9NYW6 316 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 CTSFQ9UBX1 484 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TECPR2O15040 1411 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 A0A1W2PP18 115 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 EIF1AYO14602 144 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 CYP26A1O43174 497 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 PTCD1O75127 700 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 APBB3O95704 486 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 RPN2P04844 631 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 INHAP05111 366 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 FOSL2P15408 326 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZNF30P17039 623 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 CYP2B6P20813 491 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 GALP22466 123 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ALAS2P22557 587 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ATP5C1P36542 298 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 EIF1AXP47813 144 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 PER3P56645 1201 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 JAM2P57087 298 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TPI1P60174 286 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 PPARDQ03181 441 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TLE4Q04727 773 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 FCN2Q15485 313 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 DPY19L1Q2PZI1 675 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 NDUFAF6Q330K2 333 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 RAB41Q5JT25 222 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZNF529Q6P280 563 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 MCATQ8IVS2 390 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 KSR1Q8IVT5 923 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SAMD12Q8N8I0 201 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 KIAA0895Q8NCT3 520 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZSWIM2Q8NEG5 633 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 GPR88Q9GZN0 384 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SLIRPQ9GZT3 109 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 IL22Q9GZX6 179 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.85□□□□□ -1.951e-6■■■■■ 28.4
CHD9-203ENST00000447540 ASAH2Q9NR71 780 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 CFAP97Q9P2B7 532 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SEC14L3Q9UDX4 400 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZNF222Q9UK12 451 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ZMIZ1Q9ULJ6 1067 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ICKQ9UPZ9 632 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 VWA7Q9Y334 891 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 MED12LQ86YW9 2145 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 KNTC1P50748 2209 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 A0A087X1B8 175 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 MYMKA6NI61 221 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 TRDCB7Z8K6 153 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 D6RAR5 112 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 METTL15P1P0C7V9 234 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 IGFBP5P24593 272 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SSTR1P30872 391 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 IFNGR2P38484 337 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 RPS6P62753 249 aaKnown RBP2.85□□□□□ -1.95
CHD9-203ENST00000447540 MLIPQ5VWP3 458 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SLC25A25Q6KCM7 469 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 KIAA1161Q6NSJ0 714 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 SLC35D2Q76EJ3 337 aa2.85□□□□□ -1.95
CHD9-203ENST00000447540 ALYREFQ86V81 257 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms