RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 JAKMIP1Q96N16 626 aaKnown RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SLC2A13Q96QE2 648 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SARGQ9BW04 601 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TLR10Q9BXR5 811 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SLC7A5P2Q9GIP4 190 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 LRRC4Q9HBW1 653 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF160Q9HCG1 818 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 GPATCH2LQ9NWQ4 482 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TMPRSS11EQ9UL52 423 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 VANGL2Q9ULK5 521 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 KCNK6Q9Y257 313 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 HS3ST3B1Q9Y662 390 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 PCM1Q15154 2024 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 OR5H15A6NDH6 313 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF233A6NK53 670 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TMEM150CB9EJG8 249 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 GAPDHSO14556 408 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UBFD1O14562 309 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 INSIG1O15503 277 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF749O43361 778 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 LMX1BO60663 402 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ZMPSTE24O75844 475 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 PDE9AO76083 593 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 POP4O95707 220 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CD160O95971 181 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ASS1P00966 412 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 FYNP06241 537 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 IVLP07476 585 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UQCRHP07919 91 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CCDC166P0CW27 439 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 FDPSP14324 419 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CYP2A7P20853 494 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 MMP11P24347 488 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ABCD1P33897 745 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CAPZBP47756 277 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SERPINH1P50454 418 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CASP9P55211 416 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UBE2IP63279 158 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SQLEQ14534 574 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SF3B4Q15427 424 aaKnown RBP eCLIP4.69□□□□□ -1.666e-7■■■■■ 30.8
SDCBP-205ENST00000447267 SLC25A35Q3KQZ1 300 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TUBB8Q3ZCM7 444 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 PYCR3Q53H96 274 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ALFQ53S48 1182 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF789Q5FWF6 425 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 RABGAP1LQ5R372 815 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 FAM102AQ5T9C2 384 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 GARNL3Q5VVW2 1013 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 BLOC1S2Q6QNY1 142 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UBE2R2Q712K3 238 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TRIM74Q86UV6 250 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UNC93AQ86WB7 457 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 OR5M9Q8NGP3 310 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CCDC110Q8TBZ0 833 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SLC25A43Q8WUT9 341 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ST8SIA2Q92186 375 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF396Q96N95 335 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 UBXN6Q9BZV1 441 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TP63Q9H3D4 680 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 RETREG1Q9H6L5 497 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 CHODLQ9H9P2 273 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 PHPT1Q9NRX4 125 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 INTS7Q9NVH2 962 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SEMA5BQ9P283 1151 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 IFT80Q9P2H3 777 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 DHCR7Q9UBM7 475 aaKnown RBP4.69□□□□□ -1.66
SDCBP-205ENST00000447267 GNPTGQ9UJJ9 305 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 SLC17A4Q9Y2C5 497 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 TBC1D30Q9Y2I9 924 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
SDCBP-205ENST00000447267 MPDZO75970 2070 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CMYA5Q8N3K9 4069 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 GOLGA6CA6NDK9 693 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 GOLGA6BA6NDN3 693 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 KCNU1A8MYU2 1149 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 AHRRA9YTQ3 701 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 EIF3CLB5ME19 914 aaKnown RBP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CCER2I3L3R5 266 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 HOXA3O43365 443 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CDC40O60508 579 aaKnown RBP eCLIP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 RAMP2O60895 175 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 SEC24DO94855 1032 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 PIGNO95427 931 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 VNN1O95497 513 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 LY86O95711 162 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 VIPP01282 170 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 KRT18P05783 430 aaKnown RBP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 TPM2P07951 284 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 GOLGA6DP0CG33 693 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 P4HA1P13674 534 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 FPR1P21462 350 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CASP4P49662 377 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CASP5P51878 434 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 DAOAP59103 153 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 PITX1P78337 314 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-205ENST00000447267 HSD11B2P80365 405 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 ARF5P84085 180 aa4.68□□□□□ -1.66
SDCBP-205ENST00000447267 CDK3Q00526 305 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms