RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ETHE1O95571 254 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 LYNP07948 512 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 PSMA4P25789 261 aaKnown RBP16.89■□□□□ 0.29
SMC6-206ENST00000446852 MAPK1P28482 360 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 E2F2Q14209 437 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 GTDC1Q4AE62 458 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 SLCO4C1Q6ZQN7 724 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 ERMP1Q7Z2K6 904 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 OR9A1PQ8NGU1 263 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 ZNF583Q96ND8 569 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 MBNL1Q9NR56 388 aaKnown RBP16.89■□□□□ 0.29
SMC6-206ENST00000446852 TM7SF3Q9NS93 570 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 VPS29Q9UBQ0 182 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 PCDHB3Q9Y5E6 796 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 TRBV5-3A0A0A0MS03 114 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 MAGEA13PA6NCF6 341 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 ADH1BP00325 375 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 ACPPP15309 386 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 NPPBP16860 134 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 ZNF33BQ06732 778 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 STARD3Q14849 445 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 CYP51A1Q16850 503 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 KIAA1211LQ6NV74 962 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 LRRC56Q8IYG6 542 aaPredicted RBP16.89■□□□□ 0.29
SMC6-206ENST00000446852 DTWD1Q8N5C7 304 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 OR7G3Q8NG95 312 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 GFM2Q969S9 779 aaKnown RBP16.89■□□□□ 0.29
SMC6-206ENST00000446852 HHIPQ96QV1 700 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 GDF15Q99988 308 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 COQ10BQ9H8M1 238 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 MAGEB17A8MXT2 336 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 C5AR1P21730 350 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 PLOD1Q02809 727 aaPredicted RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 TAP2Q03519 686 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 TSTA3Q13630 321 aaPredicted RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 SF1Q15637 639 aaKnown RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 CATSPEREQ5SY80 951 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 CAPN13Q6MZZ7 669 aaPredicted RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 TESCQ96BS2 214 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 CIB1Q99828 191 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 SGPP1Q9BX95 441 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 PAIP1Q9H074 479 aaKnown RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 CNOT11Q9UKZ1 510 aaKnown RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 A6NHS1 94 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 TPST1O60507 370 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 GPIP06744 558 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 CCR3P51677 355 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 FGL2Q14314 439 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 NRF1Q16656 503 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 ANKRD46Q86W74 232 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 CSGALNACT1Q8TDX6 532 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 C11orf24Q96F05 449 aaPredicted RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 MKRN2Q9H000 416 aaKnown RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 AGPAT4Q9NRZ5 378 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 GPRC5BQ9NZH0 403 aa16.88■□□□□ 0.29
SMC6-206ENST00000446852 ZFR2Q9UPR6 939 aaKnown RBP16.88■□□□□ 0.29
SMC6-206ENST00000446852 SH3BGRLO75368 114 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 S100A3P33764 101 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 CYP4F3Q08477 520 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PGS1Q32NB8 556 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 AASDHQ4L235 1098 aaPredicted RBP16.87■□□□□ 0.29
SMC6-206ENST00000446852 EP400NLQ6ZTU2 488 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PDZD3Q86UT5 571 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 AMZ2Q86W34 360 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 FAM9CQ8IZT9 166 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 OR5AR1Q8NGP9 310 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 HUS1BQ8NHY5 278 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 SLC29A1Q99808 456 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 INPP5KQ9BT40 448 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 MAN2B2Q9Y2E5 1009 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 OR1A2Q9Y585 309 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PCDHB14Q9Y5E9 798 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PCDHGA11Q9Y5H2 935 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 AP4B1Q9Y6B7 739 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 FAM149AA5PLN7 773 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 DPPA5A6NC42 116 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 HNRNPRO43390 633 aaKnown RBP16.87■□□□□ 0.29
SMC6-206ENST00000446852 DENRO43583 198 aaKnown RBP16.87■□□□□ 0.29
SMC6-206ENST00000446852 ZCCHC18P0CG32 403 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PCNAP12004 261 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 BMP2P12643 396 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 HOXB9P17482 250 aaPredicted RBP16.87■□□□□ 0.29
SMC6-206ENST00000446852 IL10P22301 178 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PTPN6P29350 595 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 TNFRSF4P43489 277 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 IRF4Q15306 451 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 RUNDC3AQ59EK9 446 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 GLYATQ6IB77 296 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 UNC5DQ6UXZ4 953 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 LRRTM4Q86VH4 590 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PROSER1Q86XN7 944 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 ANKFN1Q8N957 763 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PHC3Q8NDX5 983 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 OR10A6Q8NH74 314 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 KLK6Q92876 244 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms