RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 E5RI56 91 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 VPS26AO75436 327 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 SLITRK5O94991 958 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 CDK1P06493 297 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 HOXB8P17481 243 aaPredicted RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 OGNP20774 298 aaKnown RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 RRM2P31350 389 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 MAGEA2P43356 314 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 GZMMP51124 257 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 DOC2BQ14184 412 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 GPAT3Q53EU6 434 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 FAM20CQ8IXL6 584 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 NKAPQ8N5F7 415 aaKnown RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 GRPEL2Q8TAA5 225 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 DNAJB3Q8WWF6 145 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 TMCO6Q96DC7 493 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 TSSK3Q96PN8 268 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 TMEM39AQ9NV64 488 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 GPRC5BQ9NZH0 403 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 A3GALT2U3KPV4 340 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 GFRA2O00451 464 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 IL7P13232 177 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 DARSP14868 501 aaKnown RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 ACVR1Q04771 509 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 TWF2Q6IBS0 349 aaKnown RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 IQCF2Q8IXL9 164 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 DNAJC22Q8N4W6 341 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 SPERTQ8NA61 448 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 CD200R1Q8TD46 325 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 UTP15Q8TED0 518 aaKnown RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 RASSF5Q8WWW0 418 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 SLC7A6Q92536 515 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 MYDGFQ969H8 173 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 COQ8BQ96D53 544 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 HSH2DQ96JZ2 352 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 PPP3R2Q96LZ3 170 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 GDF15Q99988 308 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 CNPPD1Q9BV87 410 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 STMN3Q9NZ72 180 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 SLC6A14Q9UN76 642 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 PLXNB2O15031 1838 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 HMX3A6NHT5 357 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 AKR7A2O43488 359 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 IL6P05231 212 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 AQP1P29972 269 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 ACVRL1P37023 503 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 OR3A3P47888 321 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 MSANTD2Q6P1R3 559 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 BRSK1Q8TDC3 778 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 SMURF1Q9HCE7 757 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 ABCB8Q9NUT2 735 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 ACOXLQ9NUZ1 547 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 COQ3Q9NZJ6 369 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 GRIP1Q9Y3R0 1128 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 SPEF1Q9Y4P9 236 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 CCL27Q9Y4X3 112 aa13.57□□□□□ -0.24
VPS52-212ENST00000445902 DNMT3AQ9Y6K1 912 aaPredicted RBP13.57□□□□□ -0.24
VPS52-212ENST00000445902 TRBV5-3A0A0A0MS03 114 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 CLCA1A8K7I4 914 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 GPR182O15218 404 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SNX4O95219 450 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 DGKEP52429 567 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 HOXC5Q00444 222 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 DMC1Q14565 340 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 CTSL3PQ5NE16 218 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 CCDC28AQ8IWP9 274 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 MCCC1Q96RQ3 725 aaPredicted RBP13.56□□□□□ -0.24
VPS52-212ENST00000445902 CLMPQ9H6B4 373 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 NMUR1Q9HB89 426 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SERHLQ9NQF3 203 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 MAT2BQ9NZL9 334 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 BRWD3Q6RI45 1802 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SMLR1H3BR10 107 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 ADRA2AP08913 450 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 UBL4AP11441 157 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms