RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 MPC1LP0DKB6 136 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 HNMTP50135 292 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 SEC13P55735 322 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 GSTM4Q03013 218 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 GBX1Q14549 363 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 AASDHQ4L235 1098 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 LDLRAP1Q5SW96 308 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 NOXRED1Q6NXP6 359 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 SUSD6Q92537 303 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 NEIL2Q969S2 332 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 CENPNQ96H22 339 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 FOPNLQ96NB1 174 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 SLC29A3Q9BZD2 475 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 LTB4R2Q9NPC1 389 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ATXN10Q9UBB4 475 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 TRPM6Q9BX84 2022 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 PCDH8O95206 1070 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 NFATC1O95644 943 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 SOD1P00441 154 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 LDLRP01130 860 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF24P17028 368 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF621Q6ZSS3 439 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 ETFBKMTQ8IXQ9 262 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 NTRK1P04629 796 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 ANXA6P08133 673 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 LAPTM4AQ15012 233 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 NKG7Q16617 165 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 ANGPTL8Q6UXH0 198 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 TMEM126BQ8IUX1 230 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 CHERPQ8IWX8 916 aaKnown RBP16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 METTL25Q8N6Q8 603 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 FAM120BQ96EK7 910 aaKnown RBP16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 REXO4Q9GZR2 422 aaKnown RBP16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 MYO15AQ9UKN7 3530 aa16.29■□□□□ 0.2
LAPTM4B-201ENST00000445593 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 RFXANKO14593 260 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 TNFAIP8O95379 198 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 SNAP29O95721 258 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 IL6P05231 212 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 BMP2P12643 396 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 COX7A2P14406 83 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 HTR1EP28566 365 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 PRLHRP49683 370 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 CCT8P50990 548 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 AP1S2P56377 157 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ACSM2AQ08AH3 577 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 EGFLAMQ63HQ2 1017 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ACSM2BQ68CK6 577 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 GPR180Q86V85 440 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 C1orf52Q8N6N3 182 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ANKFN1Q8N957 763 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 DPH2Q9BQC3 489 aaPredicted RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 FBXO10Q9UK96 956 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ARNTLO00327 626 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 KPNA5O15131 536 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 LINC01565O15544 149 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 POP7O75817 140 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 PRKD3O94806 890 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 GPIP06744 558 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 SRPRAP08240 638 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF8P17098 575 aaPredicted RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 YAP1P46937 504 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 HSPA13P48723 471 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 DCDC1P59894 354 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 TBPL1P62380 186 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 UBE3AQ05086 875 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 CNTN1Q12860 1018 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 STK32CQ86UX6 486 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 PTRH1Q86Y79 214 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 CHPFQ8IZ52 775 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 TCAIMQ8N3R3 496 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 HIC2Q96JB3 615 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 FAM129BQ96TA1 746 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 OSBPL11Q9BXB4 747 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 MTIF3Q9H2K0 278 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF106Q9H2Y7 1883 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 GNGT2O14610 69 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 HNRNPCP07910 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 JUPP14923 745 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 AMD1P17707 334 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 CNPY1Q3B7I2 92 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 TERB1Q8NA31 727 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF740Q8NDX6 193 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF480Q8WV37 535 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 TIFAQ96CG3 184 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 PANX1Q96RD7 426 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 RPP25Q9BUL9 199 aaKnown RBP16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 ADI1Q9BV57 179 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 MAGEL2Q9UJ55 1249 aa16.28■□□□□ 0.2
LAPTM4B-201ENST00000445593 HOXC11O43248 304 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-201ENST00000445593 NDUFB5O43674 189 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms