RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 OR2Y1Q8NGV0 311 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 FKBP10Q96AY3 582 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 KRT12Q99456 494 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 WDR83Q9BRX9 315 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 DPH7Q9BTV6 452 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 ING2Q9H160 280 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 MRPS30Q9NP92 439 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 ZNF71Q9NQZ8 489 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 CUTCQ9NTM9 273 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 NDOR1Q9UHB4 597 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 BSNQ9UPA5 3926 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 DSCR3O14972 297 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC16A5O15375 505 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ALBP02768 609 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 C8GP07360 202 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ALAS2P22557 587 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 MCM3P25205 808 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 EMP3P54852 163 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 RRADP55042 308 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ETF1P62495 437 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 SP140Q13342 867 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 WASHC2DQ5SRD0 308 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 MLIPQ5VWP3 458 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ICE2Q659A1 982 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 FBXO42Q6P3S6 717 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 SUSD1Q6UWL2 747 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 TTLL10Q6ZVT0 673 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 UBE2R2Q712K3 238 aaPredicted RBP18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 PIWIL4Q7Z3Z4 852 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 MAATS1Q7Z4T9 603 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 LRRC56Q8IYG6 542 aaPredicted RBP18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 SPATA4Q8NEY3 305 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 MCOLN3Q8TDD5 553 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 PTERQ96BW5 349 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 PWWP2AQ96N64 755 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 NDNQ99608 321 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ZFYVE21Q9BQ24 234 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 PLCD4Q9BRC7 762 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 TRIM55Q9BYV6 548 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 WDR54Q9H977 334 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 MLXIPLQ9NP71 852 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 PPANQ9NQ55 473 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 ACSS2Q9NR19 701 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 CHMP2BQ9UQN3 213 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 TP53TG5Q9Y2B4 290 aa18.03■□□□□ 0.48
ATPAF2-201ENST00000444058 FAM187AA6NFU0 413 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 ARGFXA6NJG6 315 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 CEACAM4O75871 244 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 IGHEP01854 428 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 CASRP41180 1078 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 FOLR3P41439 243 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 RPL21P46778 160 aaKnown RBP18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 ZNF425Q6IV72 752 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 EEF1AKMT1Q8WVE0 214 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 CFAP36Q96G28 342 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 CCDC138Q96M89 665 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 ACAT2Q9BWD1 397 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 TRIM31Q9BZY9 425 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC26A1Q9H2B4 701 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC6A20Q9NP91 592 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC22A11Q9NSA0 550 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 MOCS1Q9NZB8 636 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 TAC3Q9UHF0 121 aa18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 PTRH2Q9Y3E5 179 aaKnown RBP18.02■□□□□ 0.48
ATPAF2-201ENST00000444058 IGKV1-8A0A0C4DH67 115 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 A0A0J9YVX5 310 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 HYKKA2RU49 373 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 DNAJB5O75953 348 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 SYF2O95926 243 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 EZRP15311 586 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 ITGAXP20702 1163 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 HRH2P25021 359 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 IMPA1P29218 277 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 CASQ1P31415 396 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 CDKN2DP55273 166 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 VSX2P58304 361 aaPredicted RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 YBX1P67809 324 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 ILF2Q12905 390 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 KLRB1Q12918 225 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PDIA2Q13087 525 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 HP1BP3Q5SSJ5 553 aaPredicted RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 RBM20Q5T481 1227 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 FAM69BQ5VUD6 431 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 FRMPD2BQ6IN97 320 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 TRMT10BQ6PF06 316 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PAQR3Q6TCH7 311 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 OVCH1Q7RTY7 1134 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PAQR7Q86WK9 346 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PTRH1Q86Y79 214 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PALM2Q8IXS6 379 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 ERP44Q9BS26 406 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PCBD2Q9H0N5 130 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PARVBQ9HBI1 364 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 WHRNQ9P202 907 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 NXT1Q9UKK6 140 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 SNX24Q9Y343 169 aa18.01■□□□□ 0.47
ATPAF2-201ENST00000444058 PCDHGB7Q9Y5F8 929 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms