RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TAX1BP1Q86VP1 789 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 STT3BQ8TCJ2 826 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 GRHL3Q8TE85 626 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CNDP1Q96KN2 507 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 IL17FQ96PD4 163 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 P2RY12Q9H244 342 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 SOX17Q9H6I2 414 aaPredicted RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CTSFQ9UBX1 484 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 TTC7AQ9ULT0 858 aaPredicted RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CELSR2Q9HCU4 2923 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 IGLV3-12A0A075B6K2 115 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ESR1P03372 595 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 CYC1P08574 325 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ZGLP1P0C6A0 271 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ICAM2P13598 275 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 RELAQ04206 551 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 KLC1Q07866 573 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 DRICH1Q6PGQ1 229 aaPredicted RBP13.18□□□□□ -0.3
PTPRE-203ENST00000442830 NDUFAF7Q7L592 441 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 SLC13A5Q86YT5 568 aaPredicted RBP13.18□□□□□ -0.3
PTPRE-203ENST00000442830 FAM20CQ8IXL6 584 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
PTPRE-203ENST00000442830 LKAAEAR1Q8TD35 194 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ATG4AQ8WYN0 398 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 MIPEPQ99797 713 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 ZBTB20Q9HC78 741 aaPredicted RBP13.18□□□□□ -0.3
PTPRE-203ENST00000442830 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 RIC8BQ9NVN3 520 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 C3orf18Q9UK00 162 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 NTNG1Q9Y2I2 539 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 KLHL20Q9Y2M5 609 aa13.18□□□□□ -0.3
PTPRE-203ENST00000442830 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 NSG1A0A0A6YYJ2 146 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 TCRBV7S2A1N4TA0A589 114 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 OR2A25A4D2G3 310 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 IQCF5A8MTL0 148 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 E2F3O00716 465 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 HNRNPRO43390 633 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 CTSVO60911 334 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 CATP04040 527 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 UQCRHP07919 91 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ANXA5P08758 320 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 STSP08842 583 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ERGP11308 486 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 PAMP19021 973 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 MCM3P25205 808 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 OR1D4P47884 311 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ARG2P78540 354 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 DSG2Q14126 1118 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 SEMA3AQ14563 771 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 NAA30Q147X3 362 aaPredicted RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ZNF787Q6DD87 383 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 CNSTQ6PJW8 725 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 OTUD6BQ8N6M0 293 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 OR2A1Q8NGT9 310 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 SMPDL3AQ92484 453 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 RERGQ96A58 199 aaPredicted RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 EBNA1BP2Q99848 306 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 SLX1AQ9BQ83 275 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 RNF32Q9H0A6 362 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 MKKSQ9NPJ1 570 aaPredicted RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 CHRAC1Q9NRG0 131 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 OLAHQ9NV23 265 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 ENTPD4Q9Y227 616 aa13.17□□□□□ -0.3
PTPRE-203ENST00000442830 MRPS2Q9Y399 296 aaKnown RBP13.17□□□□□ -0.3
PTPRE-203ENST00000442830 A0A0J9YVX5 310 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 LRRTM2O43300 516 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 BMP10O95393 424 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 MATN4O95460 622 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 SERPINA7P05543 415 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 EZRP15311 586 aaKnown RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 OGNP20774 298 aaKnown RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 GRIA1P42261 906 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 BDKRB1P46663 353 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 EIF3BP55884 814 aaKnown RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 SESN2P58004 480 aaPredicted RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 ZRSR2Q15696 482 aaKnown RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 CCNG2Q16589 344 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 PRTGQ2VWP7 1150 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 ATG9BQ674R7 924 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms