RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ICE2Q659A1 982 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 FRA10AC1Q70Z53 315 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 CCDC91Q7Z6B0 441 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 EXT2Q93063 718 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 ALKBH8Q96BT7 664 aaKnown RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 ZNF501Q96CX3 271 aaPredicted RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 TCTN2Q96GX1 697 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 TMEM79Q9BSE2 394 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 DPH7Q9BTV6 452 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 CCDC86Q9H6F5 360 aaKnown RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 SYNPO2LQ9H987 977 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 PDE7BQ9NP56 450 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 CCDC177Q9NQR7 707 aaPredicted RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 FGF21Q9NSA1 209 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 PCMTD2Q9NV79 361 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 CUEDC1Q9NWM3 386 aaPredicted RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 DKK4Q9UBT3 224 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 PLAAQ9Y263 795 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 ASB1Q9Y576 335 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 KLK4Q9Y5K2 254 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 MDC1Q14676 2089 aaKnown RBP15.4■□□□□ 0.06
USP39-205ENST00000442708 IQANK1A0A1B0GTG1 560 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 H3BMH7 237 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 GOLGA8RI6L899 631 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 TAF4O00268 1085 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 NVLO15381 856 aaKnown RBP15.4■□□□□ 0.06
USP39-205ENST00000442708 KERAO60938 352 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 ANXA5P08758 320 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 FGF5P12034 268 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 NPPBP16860 134 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 CMPK1P30085 196 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 GDF5P43026 501 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 ACAP2Q15057 778 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 RASA2Q15283 850 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 ST3GAL2Q16842 350 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 FAM83EQ2M2I3 478 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 PTCHD3Q3KNS1 767 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 TECRLQ5HYJ1 363 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 THEMIS2Q5TEJ8 643 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 PRAMEF13Q5VWM6 474 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 SH2D5Q6ZV89 423 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 LSMEM2Q8N112 164 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 OR1L3Q8NH93 324 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 STAG3L4Q8TBR4 150 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 ATL1Q8WXF7 558 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 FCRL4Q96PJ5 515 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 EGFL8Q99944 293 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 DDA1Q9BW61 102 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 SPRY4Q9C004 299 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 CHRNA10Q9GZZ6 450 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 PPCSQ9HAB8 311 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 MRPS30Q9NP92 439 aaKnown RBP15.4■□□□□ 0.06
USP39-205ENST00000442708 PTBP2Q9UKA9 531 aaKnown RBP15.4■□□□□ 0.06
USP39-205ENST00000442708 PCDHGA7Q9Y5G6 932 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 PCDHGA3Q9Y5H0 932 aa15.4■□□□□ 0.06
USP39-205ENST00000442708 TLDC2A0PJX2 215 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 OR2A25A4D2G3 310 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PABPN1LA6NDY0 278 aaKnown RBP15.39■□□□□ 0.05
USP39-205ENST00000442708 TARM1B6A8C7 271 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 TMEM150CB9EJG8 249 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 POLR1CO15160 346 aaPredicted RBP15.39■□□□□ 0.05
USP39-205ENST00000442708 CTIFO43310 598 aaKnown RBP15.39■□□□□ 0.05
USP39-205ENST00000442708 FKBP9O95302 570 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 SBK3P0C264 359 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 MSL3P1P0C860 447 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PYGBP11216 843 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 COL6A2P12110 1019 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZNF28P17035 718 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 SLC6A12P48065 614 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 RAB15P59190 212 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ERVPABLB-1P60509 514 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ACY1Q03154 408 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 COL9A2Q14055 689 aaPredicted RBP15.39■□□□□ 0.05
USP39-205ENST00000442708 IL11RAQ14626 422 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 TMTC4Q5T4D3 741 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 DCAF12Q5T6F0 453 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PRAMEF17Q5VTA0 474 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZNF425Q6IV72 752 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PWWP2BQ6NUJ5 590 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PAQR7Q86WK9 346 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZFAND4Q86XD8 727 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 KLHDC8AQ8IYD2 350 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 TMEM151AQ8N4L1 468 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PDPRQ8NCN5 879 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 RHEBL1Q8TAI7 183 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZUFSPQ96AP4 578 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 ZNF578Q96N58 590 aaPredicted RBP15.39■□□□□ 0.05
USP39-205ENST00000442708 PLCD4Q9BRC7 762 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 THSD1Q9NS62 852 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 CD274Q9NZQ7 290 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 PILRAQ9UKJ1 303 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 APC2O95996 2303 aa15.39■□□□□ 0.05
USP39-205ENST00000442708 SUPT3HB4E1H0 165 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 H7BY64 318 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 CDH16O75309 829 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 SUPT3HO75486 399 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 CDH1P12830 882 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 GGT5P36269 586 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms