RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ETV3P41162 512 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GEMP55040 296 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 MFSD10Q14728 455 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GPR68Q15743 365 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 UGT8Q16880 541 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ESCO2Q56NI9 601 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF549Q6P9A3 640 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 PRSS48Q7RTY5 328 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CILP2Q8IUL8 1156 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF548Q8NEK5 533 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 AKAP1Q92667 903 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 MRGPRX2Q96LB1 330 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 UBXN10Q96LJ8 280 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GPR21Q99679 349 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 INPP5KQ9BT40 448 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FAM83DQ9H4H8 585 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FARSBQ9NSD9 589 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF222Q9UK12 451 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 MKLN1Q9UL63 735 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 TNFSF13BQ9Y275 285 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CENPFP49454 3210 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SHROOM3Q8TF72 1996 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 TYW5A2RUC4 315 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GPR39O43194 453 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 NBNO60934 754 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SEC22BO75396 215 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CPSF4O95639 269 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 S1PR4O95977 384 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 INSRRP14616 1297 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 NPR1P16066 1061 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ITGA2P17301 1181 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 PKLRP30613 574 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 RYKP34925 604 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZFP36L2P47974 494 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CCL23P55773 120 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 PRKCDQ05655 676 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 DSC3Q14574 896 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 TARBP2Q15633 366 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 PAN2Q504Q3 1202 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 IRAK1BP1Q5VVH5 260 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CPZQ66K79 652 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 KIAA0930Q6ICG6 404 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CHMP1BQ7LBR1 199 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SPATA19Q7Z5L4 167 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ENTHD1Q8IYW4 607 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZBTB44Q8NCP5 570 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZMIZ2Q8NF64 920 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 NLGN4YQ8NFZ3 816 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 PJA1Q8NG27 643 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SPPL2AQ8TCT8 520 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 RNF170Q96K19 258 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 IL4I1Q96RQ9 567 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FAM129BQ96TA1 746 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 NPY6RQ99463 290 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 TINF2Q9BSI4 451 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 C11orf84Q9BUA3 381 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 NIFKQ9BYG3 293 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FZD8Q9H461 694 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 BEX1Q9HBH7 125 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF225Q9UK10 706 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 LY75O60449 1722 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 A0A0B4J293 547 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 LOC102723532A0A0G2JNH3 316 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FABP12A6NFH5 140 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GFRA2O00451 464 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GLP2RO95838 553 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 HMGB2P26583 209 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 BRCC3P46736 316 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 RGS6P49758 472 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CDKN1CP49918 316 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ERVPABLB-1P60509 514 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ABATP80404 500 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 VLDLRP98155 873 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SCN1BQ07699 218 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ELP6Q0PNE2 266 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 CBLBQ13191 982 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 VEPH1Q14D04 833 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SETMARQ53H47 684 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FAM171A1Q5VUB5 890 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF57Q68EA5 555 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 OR2T5Q6IEZ7 315 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 LETMD1Q6P1Q0 360 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 DOK6Q6PKX4 331 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 Q6ZSR9 355 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SLC46A3Q7Z3Q1 461 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF605Q86T29 641 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 RASAL3Q86YV0 1011 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 LIX1Q8N485 282 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SIDT2Q8NBJ9 832 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 OR9Q1Q8NGQ5 310 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 OR2T29Q8NH02 315 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ASB15Q8WXK1 588 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GGHQ92820 318 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 GTPBP3Q969Y2 492 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 L3HYPDHQ96EM0 354 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 RNF31Q96EP0 1072 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 DPCDQ9BVM2 203 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms