RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PRICKLE3O43900 615 aaPredicted RBP19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 SRPX2O60687 465 aaPredicted RBP19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 CTSVO60911 334 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 BANF1O75531 89 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 MPC1LP0DKB6 136 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 RGS4P49798 205 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 DR1Q01658 176 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 SPANXN3Q5MJ09 141 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 WASHC2DQ5SRD0 308 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 LRRC8EQ6NSJ5 796 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 ZNF549Q6P9A3 640 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 ATCAYQ86WG3 371 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 PALM2Q8IXS6 379 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 PDIK1LQ8N165 341 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 FDCSPQ8NFU4 85 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 SLCO2A1Q92959 643 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 FKBP10Q96AY3 582 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 CFAP36Q96G28 342 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 NDNQ99608 321 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 ZFYVE21Q9BQ24 234 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 ZC3H7BQ9UGR2 993 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 CDC23Q9UJX2 597 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 SAR1BQ9Y6B6 198 aa19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 A0A1W2PPV9 198 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 HYKKA2RU49 373 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 TTLL8A6PVC2 850 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 SMAPO00193 183 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 DPM1O60762 260 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 HAUS5O94927 633 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 PAFAH1B1P43034 410 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 IGFBP7Q16270 282 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 MRPL14Q6P1L8 145 aaKnown RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 SYDE1Q6ZW31 735 aaPredicted RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 UBE2R2Q712K3 238 aaPredicted RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 RNF44Q7L0R7 432 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 PIWIL4Q7Z3Z4 852 aaKnown RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 EFCAB3Q8N7B9 438 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 PPFIBP2Q8ND30 876 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 CD200R1Q8TD46 325 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 RERGQ96A58 199 aaPredicted RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 COL26A1Q96A83 441 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 CABS1Q96KC9 395 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 EBNA1BP2Q99848 306 aaKnown RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 AARSD1Q9BTE6 412 aaKnown RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 SLC6A20Q9NP91 592 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 ANKMY1Q9P2S6 941 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 NXT1Q9UKK6 140 aaKnown RBP19■□□□□ 0.63
SHROOM1-204ENST00000440118 DHRS7Q9Y394 339 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 PCDHGB7Q9Y5F8 929 aa19■□□□□ 0.63
SHROOM1-204ENST00000440118 NRP2O60462 931 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 SLC16A8O95907 504 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 ALPPP05187 535 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 ERGP11308 486 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 OR1D4P47884 311 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 MLLT10P55197 1068 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 FOXL2P58012 376 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 MORF4L2Q15014 288 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 ICE2Q659A1 982 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 FRMPD2BQ6IN97 320 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 C2CD4AQ8NCU7 369 aaPredicted RBP18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 NUDT9Q9BW91 350 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 P4HTMQ9NXG6 502 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 TAS2R13Q9NYV9 303 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 KLK4Q9Y5K2 254 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 MAU2Q9Y6X3 613 aa18.99■□□□□ 0.63
SHROOM1-204ENST00000440118 LOC105369274A0A096LPK9 316 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 LOC102723532A0A0G2JNH3 316 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 OR2A25A4D2G3 310 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 KLHL41O60662 606 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 ITGAXP20702 1163 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 CARSP49589 748 aaKnown RBP18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 FOXK1P85037 733 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 HIF1AQ16665 826 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 MUM1Q2TAK8 710 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 DCAF10Q5QP82 559 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 HP1BP3Q5SSJ5 553 aaPredicted RBP18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 IRAK1BP1Q5VVH5 260 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 OVCH1Q7RTY7 1134 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 OR4N4Q8N0Y3 316 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 MYO1HQ8N1T3 1032 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 ZNF480Q8WV37 535 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 ASB11Q8WXH4 323 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 CERS2Q96G23 380 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 VPS50Q96JG6 964 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 ZNF285Q96NJ3 590 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 TRIM31Q9BZY9 425 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 SOX17Q9H6I2 414 aaPredicted RBP18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 WDR54Q9H977 334 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 MAP10Q9P2G4 905 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 CTSFQ9UBX1 484 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 PLAAQ9Y263 795 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 MED16Q9Y2X0 877 aa18.98■□□□□ 0.63
SHROOM1-204ENST00000440118 PCSK5Q92824 1860 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 FITM1A5D6W6 292 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 EIF3FO00303 357 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 CNOT3O75175 753 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 CEACAM4O75871 244 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 ALBP02768 609 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms