RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GPX6P59796 221 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 RPS18P62269 152 aaKnown RBP22.68■■□□□ 1.22
VARS-217ENST00000440048 SP140Q13342 867 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 ERV3-1Q14264 604 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 RHBDD2Q6NTF9 364 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 BORAQ6PGQ7 559 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 C3orf62Q6ZUJ4 267 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 LRRC56Q8IYG6 542 aaPredicted RBP22.68■■□□□ 1.22
VARS-217ENST00000440048 MMGT1Q8N4V1 131 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 EXD3Q8N9H8 876 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 SEC14L1Q92503 715 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 ARHGAP9Q9BRR9 750 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 MCMBPQ9BTE3 642 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 DPH7Q9BTV6 452 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 SEMA4CQ9C0C4 833 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 RHOJQ9H4E5 214 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 PARVBQ9HBI1 364 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 MRPS30Q9NP92 439 aaKnown RBP22.68■■□□□ 1.22
VARS-217ENST00000440048 TAC3Q9UHF0 121 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 TCRBV9S1A1TA0A576 114 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 C1QL1O75973 258 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 CAPN1P07384 714 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 GSTA2P09210 222 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 FURINP09958 794 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 SAT1P21673 171 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 MAGEA4P43358 317 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 PRDX1Q06830 199 aaKnown RBP22.67■■□□□ 1.22
VARS-217ENST00000440048 NAA25Q14CX7 972 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 C1orf189Q5VU69 101 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 ICE2Q659A1 982 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 FAM198BQ6UWH4 519 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 CYS1Q717R9 158 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 ZNF843Q8N446 348 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 MED8Q96G25 268 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 CCDC138Q96M89 665 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 DPH2Q9BQC3 489 aaPredicted RBP22.67■■□□□ 1.22
VARS-217ENST00000440048 SELENOSQ9BQE4 189 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 ABCF3Q9NUQ8 709 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 STOX2Q9P2F5 926 aaPredicted RBP22.67■■□□□ 1.22
VARS-217ENST00000440048 DHCR7Q9UBM7 475 aaKnown RBP22.67■■□□□ 1.22
VARS-217ENST00000440048 SRPK3Q9UPE1 567 aa22.67■■□□□ 1.22
VARS-217ENST00000440048 MDC1Q14676 2089 aaKnown RBP22.67■■□□□ 1.22
VARS-217ENST00000440048 CCDC88CQ9P219 2028 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 IGKV1-8A0A0C4DH67 115 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 OR2A25A4D2G3 310 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 RECKO95980 971 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 RAB40ALP0C0E4 278 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 FAM87AP0C7U9 286 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 AGXTP21549 392 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 GCGRP47871 477 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 TAS2R39P59534 338 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 GUCY2DQ02846 1103 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 PHKG1Q16816 387 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 DEFB109BQ30KR1 87 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 TMEM207Q6UWW9 146 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 MBOAT1Q6ZNC8 495 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 ENDOVQ8N8Q3 282 aaKnown RBP22.66■■□□□ 1.22
VARS-217ENST00000440048 NOA1Q8NC60 698 aaKnown RBP22.66■■□□□ 1.22
VARS-217ENST00000440048 MNS1Q8NEH6 495 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 CDKL2Q92772 493 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 VPS39Q96JC1 886 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 ZNF285Q96NJ3 590 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 GBP5Q96PP8 586 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 NDC1Q9BTX1 674 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 NLNQ9BYT8 704 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 FAM117AQ9C073 453 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 ZDHHC18Q9NUE0 388 aa22.66■■□□□ 1.22
VARS-217ENST00000440048 CDC14CA4D256 554 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 FAM159BA6NKW6 160 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 CCNDBP1O95273 360 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 C1QAP02745 245 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 VSX2P58304 361 aaPredicted RBP22.65■■□□□ 1.22
VARS-217ENST00000440048 TCTE1Q5JU00 501 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 FRMPD2BQ6IN97 320 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 FBXO42Q6P3S6 717 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 RNF44Q7L0R7 432 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 SYVN1Q86TM6 617 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 PAQR7Q86WK9 346 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 KIF18AQ8NI77 898 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 PROKR1Q8TCW9 393 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 PDLIM5Q96HC4 596 aaKnown RBP22.65■■□□□ 1.22
VARS-217ENST00000440048 PLCD4Q9BRC7 762 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 LRRC4CQ9HCJ2 640 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 ENAMQ9NRM1 1142 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 STARD5Q9NSY2 213 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 TXLNGQ9NUQ3 528 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 ANKMY1Q9P2S6 941 aa22.65■■□□□ 1.22
VARS-217ENST00000440048 A0A0J9YVX5 310 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 CTAGE15A4D2H0 777 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 SRPX2O60687 465 aaPredicted RBP22.64■■□□□ 1.21
VARS-217ENST00000440048 CTAGE8P0CG41 777 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 ZNF37AP17032 561 aaPredicted RBP22.64■■□□□ 1.21
VARS-217ENST00000440048 CCR10P46092 362 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 ABATP80404 500 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 NFKB2Q00653 900 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 ILF2Q12905 390 aaKnown RBP22.64■■□□□ 1.21
VARS-217ENST00000440048 ZNF460Q14592 562 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 THEMIS2Q5TEJ8 643 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 ZNF425Q6IV72 752 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 CTAGE6Q86UF2 777 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms