RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMPRSS3P57727 454 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 RELAQ04206 551 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 NAE1Q13564 534 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 TSNQ15631 228 aaKnown RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CDKL4Q5MAI5 379 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 MROH9Q5TGP6 573 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 PRAMEF13Q5VWM6 474 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CAPN13Q6MZZ7 669 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 LCTLQ6UWM7 567 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 MBOAT1Q6ZNC8 495 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 FRA10AC1Q70Z53 315 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CMC1Q7Z7K0 106 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 MCATQ8IVS2 390 aaKnown RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 IL22RA1Q8N6P7 574 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 HNRNPLLQ8WVV9 542 aaKnown RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 MED8Q96G25 268 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 PAFAH2Q99487 392 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 PLCD4Q9BRC7 762 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 DPH7Q9BTV6 452 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 ACAT2Q9BWD1 397 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 SGPP1Q9BX95 441 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 EURLQ9NYK6 297 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 FETUBQ9UGM5 382 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 TLK1Q9UKI8 766 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 PADI1Q9ULC6 663 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 SNX7Q9UNH6 387 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 KLHL20Q9Y2M5 609 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 ACOT9Q9Y305 439 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 MAP1BP46821 2468 aaKnown RBP11.35□□□□□ -0.59
HSPG2-206ENST00000439717 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ACACAQ13085 2346 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 EXOC1LA0A1B0GW35 172 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 POC1B-GALNT4F8VUJ3 575 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 H3BMH7 237 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ZZEF1O43149 2961 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 HCRTR1O43613 425 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 SRPX2O60687 465 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 GUCA1CO95843 209 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 C2P06681 752 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 LTA4HP09960 611 aaKnown RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 MYBL2P10244 700 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 EZRP15311 586 aaKnown RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 STAT5AP42229 794 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 CSRP3P50461 194 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 BMPR2Q13873 1038 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 CSHL1Q14406 222 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 DEFB110Q30KQ9 67 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 TAF1BQ53T94 588 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 LGSNQ5TDP6 509 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF425Q6IV72 752 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 RNF44Q7L0R7 432 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 PAQR7Q86WK9 346 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 TCAIMQ8N3R3 496 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 GALNT6Q8NCL4 622 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 UHMK1Q8TAS1 419 aaKnown RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 DCAKDQ8WVC6 231 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ISL2Q96A47 359 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 KIAA1143Q96AT1 154 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF285Q96NJ3 590 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 HAUS8Q9BT25 410 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 DHRS4Q9BTZ2 278 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 FAM117AQ9C073 453 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 SLC7A5P2Q9GIP4 190 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 NMRAL1Q9HBL8 299 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 SNX15Q9NRS6 342 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 LAMA5O15230 3695 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 URB1O60287 2271 aaKnown RBP11.34□□□□□ -0.59
HSPG2-206ENST00000439717 SDK2Q58EX2 2172 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 USP24Q9UPU5 2620 aa11.34□□□□□ -0.59
HSPG2-206ENST00000439717 A0A096LPK6 155 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 IGKV1-8A0A0C4DH67 115 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 TEX51A0A1B0GUA7 166 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ZSCAN9O15535 394 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ZNF749O43361 778 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 CTSVO60911 334 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 KRT37O76014 449 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 NTRK1P04629 796 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 KLK3P07288 261 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 TYK2P29597 1187 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 DEKP35659 375 aaKnown RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 YBX1P67809 324 aaKnown RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 VAC14Q08AM6 782 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SLC29A2Q14542 456 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 TGFBIQ15582 683 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 FAM83EQ2M2I3 478 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 YOD1Q5VVQ6 348 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 FBXO42Q6P3S6 717 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms