RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 NR4A1P22736 598 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ACVR2AP27037 513 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CBSP35520 551 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 SPAM1P38567 509 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 IL5RAQ01344 420 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CBX3Q13185 183 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ITGADQ13349 1161 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CPSF6Q16630 551 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 LDLRAP1Q5SW96 308 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 LINC00299Q6ZSB3 139 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CYP4Z1Q86W10 505 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 BEND7Q8N7W2 519 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 NAT16Q8N8M0 369 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 HJURPQ8NCD3 748 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 WFDC5Q8TCV5 224 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 MCOLN3Q8TDD5 553 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 MTFMTQ96DP5 389 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CCDC90BQ9GZT6 254 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC32A1Q9H598 525 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 AKIP1Q9NQ31 210 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 KCTD5Q9NXV2 234 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 DOLKQ9UPQ8 538 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 SAMD4AQ9UPU9 718 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ERVW-1Q9UQF0 538 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 HSPE1-MOB4S4R3N1 261 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ANAPC1Q9H1A4 1944 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 GFRA2O00451 464 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 CCNDBP1O95273 360 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 B3GALT4O96024 378 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 SDC1P18827 310 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 HNF1BP35680 557 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 OCA2Q04671 838 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 BCL2L1Q07817 233 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 KEAP1Q14145 624 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 TAF12Q16514 161 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 CARD16Q5EG05 197 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 EGFLAMQ63HQ2 1017 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 CAPN13Q6MZZ7 669 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 MSANTD1Q6ZTZ1 278 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 LRRC70Q7Z2Q7 622 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 PIWIL3Q7Z3Z3 882 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 B3GNT8Q7Z7M8 397 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 ANKRD46Q86W74 232 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 TCEAL8Q8IYN2 117 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 ADGRG2Q8IZP9 1017 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 CBARPQ8N350 705 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 TMCO5AQ8N6Q1 288 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 PHOSPHO2Q8TCD6 241 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 SELENOMQ8WWX9 145 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 VMP1Q96GC9 406 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 WDR12Q9GZL7 423 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 SELENONQ9NZV5 590 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 KLHL42Q9P2K6 505 aa15.94■□□□□ 0.14
CLCNKA-203ENST00000439316 AGAP14A8MT82 685 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 NPIPB8E9PQR5 432 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SERPINB7O75635 380 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CXCL14O95715 111 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 FTH1P02794 183 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TACR1P25103 407 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC14A1Q13336 389 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 PLD1Q13393 1074 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 BOP1Q14137 746 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TPGS1Q6ZTW0 290 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 GPR65Q8IYL9 337 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ELMOD1Q8N336 334 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 OR10Q1Q8NGQ4 319 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CMTM7Q96FZ5 175 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TSSK3Q96PN8 268 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 BARD1Q99728 777 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 DUSP21Q9H596 190 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TM9SF3Q9HD45 589 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 HMG20AQ9NP66 347 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 GPRC5BQ9NZH0 403 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ERVK-18Q9QC07 812 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ABCG2Q9UNQ0 655 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 INSL5Q9Y5Q6 135 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 PIKFYVEQ9Y2I7 2098 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC22A1O15245 554 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SMAD6O43541 496 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TGM5O43548 720 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SOCS5O75159 536 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ATP6V1G1O75348 118 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SEMG1P04279 462 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ACPPP15309 386 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 PCSK2P16519 638 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CDH3P22223 829 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 MAPK1P28482 360 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CD6P30203 668 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CTNNB1P35222 781 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 BMPR1AP36894 532 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CLK3P49761 638 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 DAPP51397 102 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CXCR4P61073 352 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC35A2P78381 396 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CREMQ03060 361 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 VEPH1Q14D04 833 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 KDM4DQ6B0I6 523 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 OR2T5Q6IEZ7 315 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 CEP68Q76N32 757 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms