RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 NPIPA5E9PKD4 350 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 M0R2N6 131 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 LATO43561 262 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 FABP3P05413 133 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 HBQ1P09105 142 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 SLC9B1Q4ZJI4 515 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEK1-201ENST00000439128 ASPGQ86U10 573 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 TERB1Q8NA31 727 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 ZNF540Q8NDQ6 660 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 OR4C6Q8NH72 309 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 OR5AK3PQ8NH89 298 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 TBC1D17Q9HA65 648 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 NPIPA1Q9UND3 350 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 PCDHGB5Q9Y5G0 923 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 SHPRHQ149N8 1683 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 FAM92AA1XBS5 289 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 GP1BBP13224 206 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 TCF4P15884 667 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 ARL13AQ5H913 290 aaPredicted RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 ARMC3Q5W041 872 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 HPS6Q86YV9 775 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 RASGEF1CQ8N431 466 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 MYDGFQ969H8 173 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 IFT27Q9BW83 186 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 MMADHCQ9H3L0 296 aaPredicted RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 MVB12BQ9H7P6 319 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 WBP4O75554 376 aaKnown RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 MAOBP27338 520 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 QPCTQ16769 361 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 FAM69BQ5VUD6 431 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 HIPK1Q86Z02 1210 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 NXPE1Q8N323 547 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 SH3YL1Q96HL8 342 aaPredicted RBP11.78□□□□□ -0.52
NEK1-201ENST00000439128 CMTM6Q9NX76 183 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 PLCL2Q9UPR0 1127 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 PCDHGA2Q9Y5H1 932 aa11.78□□□□□ -0.52
NEK1-201ENST00000439128 MYOCOSA0A1B0GUC4 107 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 LINC01553A4QN01 128 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 MAGEA13PA6NCF6 341 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 PRORSD1PA6NEY8 169 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 TMX2-CTNND1H3BSU7 103 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 TNFRSF11BO00300 401 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 GALNT2Q10471 571 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 SPIN4Q56A73 249 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 OR51B5Q9H339 312 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 MTG2Q9H4K7 406 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.77□□□□□ -0.52
NEK1-201ENST00000439128 STYXL1Q9Y6J8 313 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 CIB4A0PJX0 185 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 SERPINA6P08185 405 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 FOLR3P41439 243 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 CTSKP43235 329 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 ARG2P78540 354 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 CD47Q08722 323 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.52
NEK1-201ENST00000439128 TMPRSS9Q7Z410 1059 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 DUSP23Q9BVJ7 150 aa11.77□□□□□ -0.52
NEK1-201ENST00000439128 ELOVL7A1L3X0 281 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 POLR1CO15160 346 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 CHRNGP07510 517 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 PUM1Q14671 1186 aaKnown RBP eCLIP11.77□□□□□ -0.53
NEK1-201ENST00000439128 ADRM1Q16186 407 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 CDKN3Q16667 212 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 ABHD17BQ5VST6 288 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 NLGN4XQ8N0W4 816 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 OR2T34Q8NGX1 318 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 FIBINQ8TAL6 211 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 CCNL2Q96S94 520 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 GORASP1Q9BQQ3 440 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 ACTL8Q9H568 366 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 SAR1AQ9NR31 198 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 GIN1Q9NXP7 522 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 PDP1Q9P0J1 537 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 PISDQ9UG56 409 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 ZFR2Q9UPR6 939 aaKnown RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 BCAT2O15382 392 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 GSC2O15499 205 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 ADAMTS4O75173 837 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 GBAP04062 536 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 NR2F6P10588 404 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 C4BPBP20851 252 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 MC1RQ01726 317 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 RBBP4Q09028 425 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 FAM78AQ5JUQ0 283 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 GLYATQ6IB77 296 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 UBQLNLQ8IYU4 475 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 CSNK1A1LQ8N752 337 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 HOPXQ9BPY8 73 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 GLOD5A6NK44 160 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 AGR2O95994 175 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 PFKLP17858 780 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 GRIA1P42261 906 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 CLDN2P57739 230 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms