RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TADA2AO75478 443 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 IGHV4-39P01824 125 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 TSPY3P0CV98 308 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 TSPY8P0CW00 308 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ACP2P11117 423 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF23P17027 643 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 CKMT2P17540 419 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 GM2AP17900 193 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 CBLP22681 906 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 MCCP23508 829 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 AHRP35869 848 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 TNNT2P45379 298 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 VEGFCP49767 419 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 NR0B1P51843 470 aaKnown RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 SIRPAP78324 504 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 TSPY1Q01534 308 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 PRKCZQ05513 592 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 MBTD1Q05BQ5 628 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 IL11RAQ14626 422 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 CCL15Q16663 113 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 TMEM30BQ3MIR4 351 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 C1orf141Q5JVX7 400 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ERMARDQ5T6L9 678 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 RPUSD3Q6P087 351 aaKnown RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF530Q6P9A1 599 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 CAMKMTQ7Z624 323 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ADGRA1Q86SQ6 560 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 LONP2Q86WA8 852 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF595Q8IYB9 648 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR6J1Q8NGC5 347 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 FAM76AQ8TAV0 307 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 SMPDL3BQ92485 455 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 DAZLQ92904 295 aaKnown RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 WBP1Q96G27 269 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 F2RL3Q96RI0 385 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 SERINC2Q96SA4 455 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 MRPL1Q9BYD6 325 aaKnown RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 DPAGT1Q9H3H5 408 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 OPA3Q9H6K4 179 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 UPF2Q9HAU5 1272 aaKnown RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 HHATLQ9HCP6 504 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 FAM118AQ9NWS6 357 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 BCCIPQ9P287 314 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 WDR35Q9P2L0 1181 aa3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 NFKBIL1Q9UBC1 381 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 CRNNQ9UBG3 495 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 NIP7Q9Y221 180 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 SPIN1Q9Y657 262 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P12-201ENST00000438745 KDM3BQ7LBC6 1761 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 IGLV5-45A0A087WSX0 123 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 A0A0G2JNG1 304 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 URADA6NGE7 173 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 C15orf62A8K5M9 175 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 PMS2P5A8MQ11 134 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 HEPACAM2A8MVW5 462 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MEIS2O14770 477 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 DCXO43602 365 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SPRY1O43609 319 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 PRKNO60260 465 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GGPS1O95749 300 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 CPT2P23786 658 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 EPHA2P29317 976 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MC5RP33032 325 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MMP15P51511 669 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MLLT10P55197 1068 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 TPD52P55327 224 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GAGE2BQ13066 116 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SNTB1Q13884 538 aaKnown RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 KIR2DS5Q14953 304 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 LRRC26Q2I0M4 334 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GAGE2EQ4V326 116 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ASPRV1Q53RT3 343 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 C9orf152Q5JTZ5 239 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GAGE2AQ6NT46 116 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 KLC3Q6P597 504 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC27A1Q6PCB7 646 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 PACS1Q6VY07 963 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 CRYBG2Q8N1P7 616 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 TC2NQ8N9U0 490 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 RDM1Q8NG50 284 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 CFAP61Q8NHU2 1237 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GRAPLQ8TC17 118 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF524Q96C55 264 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 LGALS12Q96DT0 336 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MTERF3Q96E29 417 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 PGAP3Q96FM1 320 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ST6GAL2Q96JF0 529 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF830Q96NB3 372 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC22A12Q96S37 553 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLX1AQ9BQ83 275 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 TRAF4Q9BUZ4 470 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ABHD6Q9BV23 337 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 RBM4Q9BWF3 364 aaKnown RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 MYOZ2Q9NPC6 264 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 CCDC177Q9NQR7 707 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC38A7Q9NVC3 462 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms