RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SUSD1Q6UWL2 747 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 KCTD8Q6ZWB6 473 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 VRK3Q8IV63 474 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 CHID1Q9BWS9 393 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 LRTM1Q9HBL6 345 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 TRNAU1APQ9NX07 287 aaKnown RBP13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 TMPRSS11EQ9UL52 423 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ITM2BQ9Y287 266 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 NUP214P35658 2090 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 EDDM13A0A1B0GTR0 161 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MANBAO00462 879 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 NPPAP01160 153 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 FCGR1AP12314 374 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MMP12P39900 470 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 GNPDA1P46926 289 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 NEK2P51955 445 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 PHEXP78562 749 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 ADAM15Q13444 863 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 PWP1Q13610 501 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 GRIN2CQ14957 1233 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 ZXDCQ2QGD7 858 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC36A3Q495N2 470 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 CES5AQ6NT32 575 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 SERPINA13PQ6UXR4 307 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 UBE2R2Q712K3 238 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 DPPA4Q7L190 304 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC15A4Q8N697 577 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 FIG4Q92562 907 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 FGF14Q92915 247 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 ZBTB18Q99592 522 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 DPY30Q9C005 99 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 FAM83DQ9H4H8 585 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 ARNTLO00327 626 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 CBFA2T3O75081 653 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 RASAL1O95294 804 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 PRNPP04156 253 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 EBLN1P0CF75 366 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 EPORP19235 508 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MSH3P20585 1137 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 NR4A1P22736 598 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 KIAA0040Q15053 153 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 CYP2A13Q16696 494 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 OTUD3Q5T2D3 398 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 TMTC4Q5T4D3 741 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 MFSD2AQ8NA29 543 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 OR10A6Q8NH74 314 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 UBTD2Q8WUN7 234 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 OR8D1Q8WZ84 308 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 SGCDQ92629 289 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 BORCS5Q969J3 196 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 THUMPD3Q9BV44 507 aaKnown RBP13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 NTMT1Q9BV86 223 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 S1PR5Q9H228 398 aa13.49□□□□□ -0.25
PTCHD3-201ENST00000438700 TTC36A6NLP5 189 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC28A1O00337 649 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 CLOCKO15516 846 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 CLDN9O95484 217 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 LDLRP01130 860 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 LAMP2P13473 410 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 GDI1P31150 447 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 HALP42357 657 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 BCAP31P51572 246 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 GTDC1Q4AE62 458 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 CACHD1Q5VU97 1274 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TMEM214Q6NUQ4 689 aaKnown RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ERAP2Q6P179 960 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 BTLAQ7Z6A9 289 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TBC1D21Q8IYX1 336 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TDHQ8IZJ6 230 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 FAM86B1Q8N7N1 296 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ADAMTS16Q8TE57 1224 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 GTF2H4Q92759 462 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 RPP25Q9BUL9 199 aaKnown RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ACPTQ9BZG2 426 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TMEM245Q9H330 911 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TRPS1Q9UHF7 1281 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 MAGEL2Q9UJ55 1249 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 IGLV3-16A0A075B6K0 115 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 SNAP29O95721 258 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 PDYNP01213 254 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 PGRP06401 933 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 OR56A5P0C7T3 313 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ELFN1P0C7U0 828 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 DCKP27707 260 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms