RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TMEM30BQ3MIR4 351 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 HSP90AB3PQ58FF7 597 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 FAM53AQ6NSI3 398 aaPredicted RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 PPP1R21Q6ZMI0 780 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 PHLDB2Q86SQ0 1253 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 RPAINQ86UA6 219 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 TIGD4Q8IY51 512 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 CCAR2Q8N163 923 aaKnown RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ARL10Q8N8L6 244 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 BMPERQ8N8U9 685 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 RASGEF1AQ8N9B8 481 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 HCAR2Q8TDS4 363 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 MRGPRDQ8TDS7 321 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 KCNE4Q8WWG9 221 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 DYRK2Q92630 601 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 PROX1Q92786 737 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 PGM2Q96G03 612 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 MGME1Q9BQP7 344 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 FSD1Q9BTV5 496 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 RBM4Q9BWF3 364 aaKnown RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 GTPBP2Q9BX10 602 aaKnown RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 OR2B2Q9GZK3 357 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ST6GALNAC4Q9H4F1 302 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 OR6C2Q9NZP2 312 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 TMED3Q9Y3Q3 217 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 SNX5Q9Y5X3 404 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 NOTCH4Q99466 2003 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 IGHV4-4A0A075B6R2 117 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 A0A087WYN8 130 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 GTPBP10A4D1E9 387 aaKnown RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 CASTOR2A6NHX0 329 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF197O14709 1029 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 EDIL3O43854 480 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 TRMUO75648 421 aaKnown RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 NADKO95544 446 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 ACSL3O95573 720 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PAK4O96013 591 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 APOHP02749 345 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 CD48P09326 243 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PATE4P0C8F1 98 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 GNB3P16520 340 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 GP5P40197 560 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 WNT5AP41221 380 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 BMXP51813 675 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 CAPZA1P52907 286 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 NAGLUP54802 743 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 B3GALT5-AS1P59052 145 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PMP22Q01453 160 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 RBM39Q14498 530 aaKnown RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 OTUD3Q5T2D3 398 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 ARHGAP17Q68EM7 881 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF790Q6PG37 636 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PSRC1Q6PGN9 363 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PET117Q6UWS5 81 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 C15orf39Q6ZRI6 1047 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 SPATA21Q7Z572 469 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 ABI3BPQ7Z7G0 1075 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 C4orf19Q8IY42 314 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 MMD2Q8IY49 270 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 KIRREL3Q8IZU9 778 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 DDHD1Q8NEL9 900 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 VANGL1Q8TAA9 524 aaPredicted RBP3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 OLIG1Q8TAK6 271 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 PIGBQ92521 554 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 FAM162AQ96A26 154 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 LRR1Q96L50 414 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 TLE6Q9H808 572 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 Q9H8V8 135 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 RASAL2Q9UJF2 1139 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 CHKBQ9Y259 395 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 IL16Q14005 1332 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 SYNRGQ9UMZ2 1314 aa3.39□□□□□ -1.87
LSM1P1-201ENST00000438629 DISP3Q9P2K9 1392 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 A0A087WW49 117 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ARHGEF37A1IGU5 675 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 HTR3EA5X5Y0 456 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TRIM64A6NGJ6 449 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TRIM64BA6NI03 449 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP6AP2O75787 350 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CDC123O75794 336 aaPredicted RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 KRT33AO76009 404 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 HSPA4LO95757 839 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 IGLV1-44P01699 117 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 IGHDP01880 384 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CEACAM1P13688 526 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP6V1B1P15313 513 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 PDGFRAP16234 1089 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 IFNAR1P17181 557 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CEBPBP17676 345 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CYP11B2P19099 503 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 EPORP19235 508 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ALDH4A1P30038 563 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 HOXC13P31276 330 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 MAP2K2P36507 400 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP6V1E1P36543 226 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms