RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RBM41Q96IZ5 413 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 THOC3Q96J01 351 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZBTB45Q96K62 511 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ATG10Q9H0Y0 220 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 NAPBQ9H115 298 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 BICC1Q9H694 974 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRRC19Q9H756 370 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ACTR8Q9H981 624 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 GBA2Q9HCG7 927 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 MTMR4Q9NYA4 1195 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLCO1C1Q9NYB5 712 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ATXN10Q9UBB4 475 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 MBD2Q9UBB5 411 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 POLLQ9UGP5 575 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 IL20RAQ9UHF4 553 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 MGAT4BQ9UQ53 548 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC22A14Q9Y267 594 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 MRPS17Q9Y2R5 130 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 UBE2J1Q9Y385 318 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM184BQ9Y519 407 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZHX2Q9Y6X8 837 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 DCAF1Q9Y4B6 1507 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 A0A0U1RQV5 110 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM237AA0A1B0GTK4 181 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MACROD2A1Z1Q3 448 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ARHGEF35A5YM69 484 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ASB14A6NK59 587 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TCP11X1B4DZS4 312 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 KBTBD13C9JR72 458 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 H0YIG0 161 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF701M0R085 212 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 HIP1O00291 1037 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CTDSPLO15194 276 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MAGEB2O15479 319 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ECE2O60344 883 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CSO75390 466 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MOSPD3O75425 235 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 C1QL1O75973 258 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CDK14O94921 469 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 HAUS5O94927 633 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZFPL1O95159 310 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 HEXAP06865 529 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CAPN1P07384 714 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 HOXB6P17509 224 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRKACAP17612 351 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 UCP1P25874 307 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PSMB4P28070 264 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ACADLP28330 430 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 RRM2P31350 389 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 UQCRC1P31930 480 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SHMT1P34896 483 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MAGEB1P43366 347 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 GPR4P46093 362 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PXNP49023 591 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF134P52741 427 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 EEFSECP57772 596 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 RPL23AP62750 156 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PDE1BQ01064 536 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TLE3Q04726 772 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 KDSRQ06136 332 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 BST1Q10588 318 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPP1R8Q12972 351 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLAQ13239 276 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ENPP2Q13822 863 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 IL13RA2Q14627 380 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SRSF7Q16629 238 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ANKRD55Q3KP44 614 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TBC1D25Q3MII6 688 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM119Q4V9L6 283 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PDLIM3Q53GG5 364 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM76BQ5HYJ3 339 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPANXN2Q5MJ10 180 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 DHRS7BQ6IAN0 325 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZBTB49Q6ZSB9 765 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM26Q6ZUK4 368 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PAQR9Q6ZVX9 377 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 BZW1Q7L1Q6 419 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PHLDB2Q86SQ0 1253 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FJX1Q86VR8 437 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CAMK1DQ8IU85 385 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 C4orf19Q8IY42 314 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPARTQ8N0X7 666 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 METTL25Q8N6Q8 603 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ASCC1Q8N9N2 400 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM71CQ8NEG0 241 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 OR56A1Q8NGH5 318 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZFP28Q8NHY6 868 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC2A14Q8TDB8 520 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 DQX1Q8TE96 717 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PIBF1Q8WXW3 757 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRIB2Q92519 343 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 KIFAP3Q92845 792 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM46BQ96A09 425 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAR2Q96K12 515 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 KLHL32Q96NJ5 620 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 BTBD9Q96Q07 612 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRNT1Q96Q11 434 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ALS2CR12Q96Q35 445 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms