RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AP2M1Q96CW1 435 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CEP295NLQ96MC4 621 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CAPN10Q9HC96 672 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ANKHQ9HCJ1 492 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 TRIM39Q9HCM9 518 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SEMA3GQ9NS98 782 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF624Q9P2J8 865 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 POFUT2Q9Y2G5 429 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SPO11Q9Y5K1 396 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 LYVE1Q9Y5Y7 322 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SPACA6W5XKT8 324 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NUP205Q92621 2012 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 LOC285095A0A1B0GVY8 99 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 GRXCR2A6NFK2 248 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NEDD8-MDP1E9PL57 170 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PLOD2O00469 737 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ATE1O95260 518 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 MT-ND2P03891 347 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 MAP2K4P45985 399 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PLA2G16P53816 162 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CASP9P55211 416 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 COPZ1P61923 177 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NFATC2Q13469 925 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 TYSND1Q2T9J0 566 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 GPAT3Q53EU6 434 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NHSL2Q5HYW2 709 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 LETMD1Q6P1Q0 360 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 C17orf64Q86WR6 236 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NXPE1Q8N323 547 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 C1orf52Q8N6N3 182 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ABHD11Q8NFV4 315 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 DIRAS2Q96HU8 199 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 KCNS3Q9BQ31 491 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CNPPD1Q9BV87 410 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 RETREG1Q9H6L5 497 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 RPRD1BQ9NQG5 326 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 KLHL1Q9NR64 748 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PTGFRNQ9P2B2 879 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 RNF6Q9Y252 685 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 OARD1Q9Y530 152 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CDK5RAP2Q96SN8 1893 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 COL24A1Q17RW2 1714 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ARFGEF1Q9Y6D6 1849 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 FUOMA2VDF0 154 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 HAX1O00165 279 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CASKO14936 926 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 B4GAT1O43505 415 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 AP2A2O94973 939 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PCSK6P29122 969 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NOS3P29474 1203 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 KDELR2P33947 212 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ALDH3B2P48448 385 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ADAM17P78536 824 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SP3Q02447 781 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PTSQ03393 145 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 VMACQ2NL98 169 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 FNDC3BQ53EP0 1204 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 LDLRAD1Q5T700 205 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF544Q6NX49 715 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 TPRG1Q6ZUI0 275 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 FUNDC1Q8IVP5 155 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 DCAF4L2Q8NA75 395 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 OR2AP1Q8NGE2 309 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 LGALS12Q96DT0 336 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CRELD1Q96HD1 420 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 COL21A1Q96P44 957 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 GPR78Q96P69 363 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SPRTNQ9H040 489 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 MMP27Q9H306 513 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 MAGIXQ9H6Y5 334 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PLAC1Q9HBJ0 212 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 MAP10Q9P2G4 905 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 CD300AQ9UGN4 299 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 OAS3Q9Y6K5 1087 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 FAM240BA0A1B0GVZ2 78 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 M0QX08 132 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 AGRPO00253 132 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLC9A3R1O14745 358 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 STX11O75558 287 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 OAZ2O95190 189 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PRKAR1AP10644 381 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 DCTP40126 519 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 RPL34P49207 117 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PTPN5P54829 565 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MXD1Q05195 221 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 APOFQ13790 326 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SCARB2Q14108 478 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SNAPC1Q16533 368 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 LRRC73Q5JTD7 316 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM236Q5W0B7 351 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 NCCRP1Q6ZVX7 275 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 DSG4Q86SJ6 1040 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 DPP10Q8N608 796 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF513Q8N8E2 541 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ARRDC2Q8TBH0 407 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms