RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 A0A1B0GUL6 1792 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 ALPIP09923 528 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 HSD11B1P28845 292 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 XKP51811 444 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 GBX2P52951 348 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 RPS21P63220 83 aaKnown RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 TLR1Q15399 786 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 DCUN1D3Q8IWE4 304 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 TPST2O60704 377 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 DECR1Q16698 335 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 DUOXA1Q1HG43 343 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 FIP1L1Q6UN15 594 aaKnown RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 ZSCAN1Q8NBB4 408 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 ARHGAP39Q9C0H5 1083 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 STRADBQ9C0K7 418 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 KLF15Q9UIH9 416 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 M0R2N6 131 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 HAS3O00219 553 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 PAQR3Q6TCH7 311 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 Q6ZVU0 165 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 FAM13CQ8NE31 585 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 OR13C4Q8NGS5 318 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 CAPSLQ8WWF8 208 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 MOAP1Q96BY2 351 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 FAM83CQ9BQN1 747 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 LYARQ9NX58 379 aaKnown RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 CPNE3O75131 537 aaKnown RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 MYCLP1P12525 358 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 CHRNA4P43681 627 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 SLC18A1P54219 525 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 SIM2Q14190 667 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 IQCCQ4KMZ1 466 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-204ENST00000436978 PEX16Q9Y5Y5 336 aa15.48■□□□□ 0.07
PTPN13-204ENST00000436978 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 NPPAP01160 153 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PRKCHP24723 683 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 GALNT2Q10471 571 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 TNFAIP8L2Q6P589 184 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 P2RY8Q86VZ1 359 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 HMGN1P05114 100 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 DNAJA1P31689 397 aaKnown RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 BTN3A2P78410 334 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 SCN1BQ07699 218 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PDCD4Q53EL6 469 aaKnown RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ARHGAP40Q5TG30 622 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 KLHL36Q8N4N3 616 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 FAM46DQ8NEK8 389 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 SLC5A11Q8WWX8 675 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 RAB7BQ96AH8 199 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 TJP1Q07157 1748 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 RPLP0P05388 317 aaKnown RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 UPP1Q16831 310 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PLET1Q6UQ28 207 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 GRASPQ7Z6J2 395 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 SETD6Q8TBK2 473 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ZNF717Q9BY31 904 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 POPDC3Q9HBV1 291 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 C9IYK1 514 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 LEFTY2O00292 366 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 NR4A1P22736 598 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PAX7P23759 505 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ADGRE1Q14246 886 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PLA2G15Q8NCC3 412 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ERI3O43414 337 aaKnown RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ANXA8P13928 327 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 PLEKHS1Q5SXH7 462 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 TXNDC8Q6A555 127 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 C15orf40Q8WUR7 153 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 TOP1MTQ969P6 601 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ACTL8Q9H568 366 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 FZD4Q9ULV1 537 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 AIREO43918 545 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 ZBTB11O95625 1053 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 SWI5Q1ZZU3 235 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 TMCO2Q7Z6W1 182 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 SLC2A11Q9BYW1 496 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 FAM240BA0A1B0GVZ2 78 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 FAM159BA6NKW6 160 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 CDC7O00311 574 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 VLDLRP98155 873 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 E2F2Q14209 437 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 RBM48Q5RL73 367 aaKnown RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 LRTOMTQ8WZ04 291 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 BHLHE41Q9C0J9 482 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 CD320Q9NPF0 282 aa15.47■□□□□ 0.07
PTPN13-204ENST00000436978 NLE1Q9NVX2 485 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-204ENST00000436978 MTMR11A4FU01 709 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 CAPN8A6NHC0 703 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 KLHL6Q8WZ60 621 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 PIWIL1Q96J94 861 aaKnown RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 POFUT2Q9Y2G5 429 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 NOX1Q9Y5S8 564 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 CPED1A4D0V7 1026 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 AREL1O15033 823 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 SLC11A1P49279 550 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 ARRB1P49407 418 aaPredicted RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 MTPNP58546 118 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 SLC51AQ86UW1 340 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms