RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TCRBV9S1A1TA0A576 114 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GFYI3L273 518 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 CDC7O00311 574 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 NKX2-8O15522 239 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PRICKLE3O43900 615 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 KATNA1O75449 491 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GUCA1CO95843 209 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 EIF2S1P05198 315 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 FAM157BP0CG42 384 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 CBSLP0DN79 551 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ENO3P13929 434 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 WT1P19544 449 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ALAS2P22557 587 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 FDXRP22570 491 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 CD82P27701 267 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 OAS2P29728 719 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ATP5DP30049 168 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 RPA3P35244 121 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 CBSP35520 551 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GMPRP36959 345 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 EIF1AXP47813 144 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 RGS4P49798 205 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC12A2P55011 1212 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 TMPRSS3P57727 454 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 TAS2R39P59534 338 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 TUBB4BP68371 445 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GBX1Q14549 363 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 EFTUD2Q15029 972 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 UAP1Q16222 522 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PHKG1Q16816 387 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC5A12Q1EHB4 618 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GLE1Q53GS7 698 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 THEMIS2Q5TEJ8 643 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 C1orf189Q5VU69 101 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 FCRL6Q6DN72 434 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 LCN10Q6JVE6 187 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 FIGLAQ6QHK4 219 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MBOAT1Q6ZNC8 495 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 KIAA0408Q6ZU52 694 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 NEK10Q6ZWH5 1172 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GPR155Q7Z3F1 870 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC26A11Q86WA9 606 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZC3HC1Q86WB0 502 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SYTL1Q8IYJ3 562 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 VWA5B2Q8N398 1253 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 C19orf47Q8N9M1 422 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC38A9Q8NBW4 561 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR2A1Q8NGT9 310 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MCOLN3Q8TDD5 553 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF480Q8WV37 535 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ASB11Q8WXH4 323 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 DLG3Q92796 817 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MR1Q95460 341 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GTPBP3Q969Y2 492 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC22A18Q96BI1 424 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF837Q96EG3 531 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MED8Q96G25 268 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 TCTN2Q96GX1 697 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 VPS39Q96JC1 886 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PITPNM3Q9BZ71 974 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 B3GNT4Q9C0J1 378 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PRORYQ9H606 182 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 GPN2Q9H9Y4 310 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 FANCEQ9HB96 536 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SYTL2Q9HCH5 934 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 BRD7Q9NPI1 651 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZDHHC18Q9NUE0 388 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 SEMA5BQ9P283 1151 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 STOX2Q9P2F5 926 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MTRF1LQ9UGC7 380 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 NDOR1Q9UHB4 597 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 IL17BQ9UHF5 180 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 IKZF3Q9UKT9 509 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PADI1Q9ULC6 663 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 NFU1Q9UMS0 254 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 PDE10AQ9Y233 779 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 BTRCQ9Y297 605 aa5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 MRPS18BQ9Y676 258 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 URB1O60287 2271 aaKnown RBP5.55□□□□□ -1.52
HMGB3P24-201ENST00000433260 LOC105369274A0A096LPK9 316 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 LOC102723532A0A0G2JNH3 316 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 A0A1W2PPV9 198 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PABPN1LA6NDY0 278 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 NPEPPSL1A6NEC2 478 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FAM159BA6NKW6 160 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 E7ENX8 843 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 E7EQ34 232 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 POC1B-GALNT4F8VUJ3 575 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 H7BY64 318 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 MYO1CO00159 1063 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PHGDHO43175 533 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF749O43361 778 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 NRP2O60462 931 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR2B3O76000 313 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ACSL3O95573 720 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 DLGAP3O95886 979 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC16A8O95907 504 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 STATHP02808 62 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms