RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TBC1D17Q9HA65 648 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 LRRC4Q9HBW1 653 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 SDR39U1Q9NRG7 319 aaPredicted RBP1.94□□□□□ -2.1
CDC40-204ENST00000431461 ZDHHC18Q9NUE0 388 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 EXOC1Q9NV70 894 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 INTS10Q9NVR2 710 aaKnown RBP1.94□□□□□ -2.1
CDC40-204ENST00000431461 ARGLU1Q9NWB6 273 aaPredicted RBP1.94□□□□□ -2.1
CDC40-204ENST00000431461 ERAP1Q9NZ08 941 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 VPS18Q9P253 973 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 CACNG4Q9UBN1 327 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 RASAL2Q9UJF2 1139 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 MTUS1Q9ULD2 1270 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 STUB1Q9UNE7 303 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 KCNJ14Q9UNX9 436 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 LIPGQ9Y5X9 500 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 SELENOKQ9Y6D0 94 aa1.94□□□□□ -2.1
CDC40-204ENST00000431461 FLT1P17948 1338 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 SOS1Q07889 1333 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 PCDH11YQ9BZA8 1340 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 IGHV4-4A0A075B6R2 117 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 A0A087WW49 117 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 A0A1W2PRQ8 180 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 NKX6-3A6NJ46 265 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 DUXAA6NLW8 204 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 C2CD4DB7Z1M9 353 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZNF197O14709 1029 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 TADA2AO75478 443 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 RAD51DO75771 328 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 TOMM70O94826 608 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 CSN3P07498 182 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 HMBSP08397 361 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 PRSS56P0CW18 603 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 SPP1P10451 314 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 IFNAR1P17181 557 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 CEBPBP17676 345 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 CCR10P46092 362 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ATP12AP54707 1039 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 MFAP3P55082 362 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 HUNKP57058 714 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 GSDMDP57764 484 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 CYCSP99999 105 aaKnown RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 TRAP1Q12931 704 aaKnown RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 PRKAA1Q13131 559 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 TUBB2AQ13885 445 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZNF273Q14593 569 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 RRS1Q15050 365 aaKnown RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 CA9Q16790 459 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 TMEM30BQ3MIR4 351 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 UGT3A2Q3SY77 523 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ODF2Q5BJF6 829 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 XKR6Q5GH73 641 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 LRRC73Q5JTD7 316 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ARHGEF16Q5VV41 709 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZNF790Q6PG37 636 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 NUP54Q7Z3B4 507 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ARHGAP22Q7Z5H3 698 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 GPR141Q7Z602 305 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 APLFQ8IW19 511 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 CCDC60Q8IWA6 550 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 KLHDC8BQ8IXV7 354 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 LGI2Q8N0V4 545 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 PRSS35Q8N3Z0 413 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 DNAJC22Q8N4W6 341 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 RAB42Q8N4Z0 105 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 FAM89BQ8N5H3 189 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 NKAIN3Q8N8D7 197 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZNF248Q8NDW4 579 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 DDHD1Q8NEL9 900 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 OR5AP2Q8NGF4 316 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 FGFBP3Q8TAT2 258 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 GRHL3Q8TE85 626 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 TSACCQ96A04 125 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 FAM71F1Q96KD3 344 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 LRR1Q96L50 414 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZNF558Q96NG5 402 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 OLFM1Q99784 485 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ADPGKQ9BRR6 497 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 MLPHQ9BV36 600 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 TUBB2BQ9BVA1 445 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 GTPBP2Q9BX10 602 aaKnown RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 NACAP1Q9BZK3 213 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 SNX25Q9H3E2 840 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 SIX2Q9NPC8 291 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 PDRG1Q9NUG6 133 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 OSER1Q9NX31 292 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 PKD2L2Q9NZM6 624 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.93□□□□□ -2.1
CDC40-204ENST00000431461 WDR35Q9P2L0 1181 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 POLLQ9UGP5 575 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 IL36AQ9UHA7 158 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 SLC12A6Q9UHW9 1150 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 CHKBQ9Y259 395 aa1.93□□□□□ -2.1
CDC40-204ENST00000431461 STK36Q9NRP7 1315 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 KAT6BQ8WYB5 2073 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 A0A1W2PPW3 197 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 FAM149AA5PLN7 773 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 OOEPA6NGQ2 149 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ENO4A6NNW6 628 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 TMEM150CB9EJG8 249 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 HHLA1C9JL84 531 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms