RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TCF7L2Q9NQB0 619 aa17.63■□□□□ 0.41
HMGN1-206ENST00000431390 POT1Q9NUX5 634 aa17.63■□□□□ 0.41
HMGN1-206ENST00000431390 RALYQ9UKM9 306 aaKnown RBP17.63■□□□□ 0.41
HMGN1-206ENST00000431390 TIMM22Q9Y584 194 aa17.63■□□□□ 0.41
HMGN1-206ENST00000431390 PCM1Q15154 2024 aa17.63■□□□□ 0.41
HMGN1-206ENST00000431390 WFS1O76024 890 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CELA2BP08218 269 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-206ENST00000431390 NPPBP16860 134 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 EPHA3P29320 983 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 HMOX2P30519 316 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 SLC19A1P41440 591 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 E2F2Q14209 437 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 PRAMEF14Q5SWL7 426 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 PRAMEF13Q5VWM6 474 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 OR2L8Q8NGY9 312 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 TUBB1Q9H4B7 451 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 WDR55Q9H6Y2 383 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-206ENST00000431390 PILRBQ9UKJ0 227 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 RNF11Q9Y3C5 154 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 DYRK1BQ9Y463 629 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 KCNE1BA0A087WTH5 132 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CCT8L1PA6NM43 557 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 PIP5K1BO14986 540 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CCDC22O60826 627 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 SERPINA6P08185 405 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CASP2P42575 452 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 SHC2P98077 582 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 IRF8Q02556 426 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 IFT88Q13099 833 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CHIT1Q13231 466 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 C1orf61Q13536 156 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 TBCCQ15814 346 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 PLA2G2CQ5R387 149 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 SUSD1Q6UWL2 747 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-206ENST00000431390 MTDHQ86UE4 582 aaKnown RBP17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CEP70Q8NHQ1 597 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 WDR34Q96EX3 536 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 OR52B2Q96RD2 323 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 CAAP1Q9H8G2 361 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 ABCF3Q9NUQ8 709 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 ICKQ9UPZ9 632 aa17.62■□□□□ 0.41
HMGN1-206ENST00000431390 ATXN2Q99700 1313 aaKnown RBP17.61■□□□□ 0.41
HMGN1-206ENST00000431390 GOLGA8QA0A0J9YX86 632 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 GOLGA8OA6NCC3 632 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 E7EQ34 232 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 GOLGA8NF8WBI6 632 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 PRAMEF4O60810 478 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 VPS4BO75351 444 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 JUPP14923 745 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 SHMT2P34897 504 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 MPLP40238 635 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 HNF4AP41235 474 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 DPP6P42658 865 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 UBE2IP63279 158 aaKnown RBP17.61■□□□□ 0.41
HMGN1-206ENST00000431390 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-206ENST00000431390 LSM12Q3MHD2 195 aaKnown RBP17.61■□□□□ 0.41
HMGN1-206ENST00000431390 THEMIS2Q5TEJ8 643 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 PRAMEF9Q5VWM5 478 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 PEAR1Q5VY43 1037 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-206ENST00000431390 TRIM48Q8IWZ4 208 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 DDIASQ8IXT1 998 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 NAGSQ8N159 534 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 SFRP1Q8N474 314 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 FITM2Q8N6M3 262 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 LINC01555Q8NAE3 123 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 LMX1AQ8TE12 382 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 NEIL2Q969S2 332 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 PPP1R36Q96LQ0 422 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 MYLK2Q9H1R3 596 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 EHD1Q9H4M9 534 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 TRIM33Q9UPN9 1127 aa17.61■□□□□ 0.41
HMGN1-206ENST00000431390 A0A1B0GVT2 93 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 VIPP01282 170 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 KRT6AP02538 564 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 KRT6BP04259 564 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 HOXD12P35452 270 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 CTSKP43235 329 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 KRT6CP48668 564 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 XKR7Q5GH72 579 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 XKR6Q5GH73 641 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 SPDYAQ5MJ70 313 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 ATG9BQ674R7 924 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 TCEAL6Q6IPX3 200 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 GRHL2Q6ISB3 625 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 SLCO4C1Q6ZQN7 724 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-206ENST00000431390 RBM12BQ8IXT5 1001 aaKnown RBP17.6■□□□□ 0.41
HMGN1-206ENST00000431390 GBP7Q8N8V2 638 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-206ENST00000431390 AVL9Q8NBF6 648 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 FAM46DQ8NEK8 389 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 ZDHHC1Q8WTX9 485 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 SLC5A11Q8WWX8 675 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 CCT6BQ92526 530 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 USP7Q93009 1102 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 TCEAL3Q969E4 200 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 PTCD3Q96EY7 689 aaKnown RBP17.6■□□□□ 0.41
HMGN1-206ENST00000431390 SLC40A1Q9NP59 571 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 OR6C2Q9NZP2 312 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms