RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GNGT2O14610 69 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 HOXC11O43248 304 aaPredicted RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 TLL1O43897 1013 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 CREG1O75629 220 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 SNAP29O95721 258 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 CST1P01037 141 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 PRNPP04156 253 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 CYP17A1P05093 508 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 THRBP10828 461 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 HOXB9P17482 250 aaPredicted RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 CEBPBP17676 345 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 WEE1P30291 646 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 C21orf58P58505 322 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 NTHL1P78549 312 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 FPGSQ05932 587 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 MYBPC3Q14896 1274 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 SLC44A4Q53GD3 710 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 ENPP6Q6UWR7 440 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 GPR141Q7Z602 305 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 GRASPQ7Z6J2 395 aaPredicted RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 ADAMTS16Q8TE57 1224 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 MED8Q96G25 268 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 HHIPQ96QV1 700 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 EPHX3Q9H6B9 360 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 BRF2Q9HAW0 419 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 FAM120CQ9NX05 1096 aaKnown RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
THBS3-202ENST00000428962 VPS29Q9UBQ0 182 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
THBS3-202ENST00000428962 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 ALPLP05186 524 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 CISD3P0C7P0 127 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 PCNAP12004 261 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 EPCAMP16422 314 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 TACR1P25103 407 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 TTKP33981 857 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 CDK9P50750 372 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 PHC1P78364 1004 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 TMEM115Q12893 351 aaPredicted RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 PON2Q15165 354 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 RBBP5Q15291 538 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 CCNYL2Q5T2Q4 361 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 PARS2Q7L3T8 475 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 LPCAT2Q7L5N7 544 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 STK32CQ86UX6 486 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 PHACTR4Q8IZ21 702 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 SLC22A15Q8IZD6 547 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 EID3Q8N140 333 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 ZCCHC7Q8N3Z6 543 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 WDR20Q8TBZ3 569 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 PNPT1Q8TCS8 783 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 ING5Q8WYH8 240 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 GDF15Q99988 308 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 GPRC5BQ9NZH0 403 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 FAM8A1Q9UBU6 413 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.28
THBS3-202ENST00000428962 CEP290O15078 2479 aa13.27□□□□□ -0.28
THBS3-202ENST00000428962 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 E7EQ34 232 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 PRAMEF4O60810 478 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 PRKD3O94806 890 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 BMP8BP34820 402 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 GZMMP51124 257 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 CTSCP53634 463 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ACSM2AQ08AH3 577 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ELP6Q0PNE2 266 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 NAE1Q13564 534 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 DOC2AQ14183 400 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ZNF648Q5T619 568 aaPredicted RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 PRAMEF9Q5VWM5 478 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 TTC23Q5W5X9 447 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ACSM2BQ68CK6 577 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 PSRC1Q6PGN9 363 aaPredicted RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 TBPL2Q6SJ96 375 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 SERPINA11Q86U17 422 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 ANKRD46Q86W74 232 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 OFCC1Q8IZS5 231 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 FAM86B1Q8N7N1 296 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 FBXO15Q8NCQ5 510 aaPredicted RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 OR56A3Q8NH54 315 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 REPS1Q96D71 796 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 DTD2Q96FN9 168 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 INPP5KQ9BT40 448 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 RBM4Q9BWF3 364 aaKnown RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 CARS2Q9HA77 564 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms