RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MED16Q9Y2X0 877 aa14.83□□□□□ -0.04
SEC13-210ENST00000428626 HYKKA2RU49 373 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 KPNA5O15131 536 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 CEP104O60308 925 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 FKBP9O95302 570 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 ALPPP05187 535 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 MAGEA6P43360 314 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 VPS41P49754 854 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 YOD1Q5VVQ6 348 aaPredicted RBP14.82□□□□□ -0.04
SEC13-210ENST00000428626 KIAA0930Q6ICG6 404 aaPredicted RBP14.82□□□□□ -0.04
SEC13-210ENST00000428626 TTC23LQ6PF05 361 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 SUSD1Q6UWL2 747 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 IGFL2Q6UWQ7 119 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 C4orf22Q6V702 233 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 ZNF662Q6ZS27 426 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 PARP9Q8IXQ6 854 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 PRSS58Q8IYP2 241 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 AGGF1Q8N302 714 aaeCLIP14.82□□□□□ -0.04
SEC13-210ENST00000428626 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
SEC13-210ENST00000428626 OR11G2Q8NGC1 345 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 GIMAP7Q8NHV1 300 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 GSDMBQ8TAX9 411 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 DPH7Q9BTV6 452 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 ILKAPQ9H0C8 392 aaPredicted RBP14.82□□□□□ -0.04
SEC13-210ENST00000428626 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 ZKSCAN5Q9Y2L8 839 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 CACNA1DQ01668 2161 aa14.82□□□□□ -0.04
SEC13-210ENST00000428626 WIPF3A6NGB9 483 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 FFAR3O14843 346 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 GPR42O15529 346 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 SRPX2O60687 465 aaPredicted RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 EIF2S1P05198 315 aaKnown RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 ATP5DP30049 168 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 CCNFP41002 786 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 ADARP55265 1226 aaKnown RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 CDK16Q00536 496 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 KLC1Q07866 573 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 PRTGQ2VWP7 1150 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 KLHL38Q2WGJ6 581 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 MRNIPQ6NTE8 343 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 LAPTM4BQ86VI4 370 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 CILP2Q8IUL8 1156 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 ZADH2Q8N4Q0 377 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 OR9A1PQ8NGU1 263 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 STT3BQ8TCJ2 826 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 NACC2Q96BF6 587 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 C8orf44Q96CB5 159 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 SLC29A3Q9BZD2 475 aa14.81□□□□□ -0.04
SEC13-210ENST00000428626 CUEDC1Q9NWM3 386 aaPredicted RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 DIDO1Q9BTC0 2240 aaKnown RBP14.81□□□□□ -0.04
SEC13-210ENST00000428626 ZGRF1Q86YA3 2104 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 H0YGG7 62 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 MYO1CO00159 1063 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 PSIP1O75475 530 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 IPO13O94829 963 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 KLHL18O94889 574 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 CLDN1O95832 211 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 LDLRP01130 860 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ESR1P03372 595 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ZGLP1P0C6A0 271 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 PIM1P11309 404 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 PKMP14618 531 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 CHRM3P20309 590 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 OGNP20774 298 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 VARSP26640 1264 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 COL8A1P27658 744 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 GLRBP48167 497 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 CLCN7P51798 805 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 EFNA3P52797 238 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ARF3P61204 181 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 CCZ1BP86790 482 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 CCZ1P86791 482 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 GPS1Q13098 491 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 RBBP7Q16576 425 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 FAM214AQ32MH5 1076 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 TUBB8Q3ZCM7 444 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 VWA2Q5GFL6 755 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 NEPROQ6NW34 567 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ZNF549Q6P9A3 640 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 SDCCAG8Q86SQ7 713 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 PAQR7Q86WK9 346 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 DENND6AQ8IWF6 608 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 SHISA5Q8N114 240 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ARHGEF39Q8N4T4 335 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 PPFIBP2Q8ND30 876 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 FOPNLQ96NB1 174 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 TCF12Q99081 682 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 PKP4Q99569 1192 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 ZFYVE21Q9BQ24 234 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 WDR77Q9BQA1 342 aaPredicted RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 ZNF304Q9HCX3 659 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 SEMA3GQ9NS98 782 aa14.8□□□□□ -0.04
SEC13-210ENST00000428626 COPG1Q9Y678 874 aaKnown RBP14.8□□□□□ -0.04
SEC13-210ENST00000428626 IGLV3-12A0A075B6K2 115 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 ZCWPW2A0A1B0GU75 182 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 AP3B1O00203 1094 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 CCDC175P0C221 793 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 CTBP1Q13363 440 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms