RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 SKIV2L2P42285 1042 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 EMP3P54852 163 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 TAP2Q03519 686 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 CBLBQ13191 982 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 WHAMMP3Q1A5X7 153 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 UBAP2Q5T6F2 1119 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 UGT3A1Q6NUS8 523 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 MCATQ8IVS2 390 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 MYO1HQ8N1T3 1032 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 ENDOVQ8N8Q3 282 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 SMPDL3AQ92484 453 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 DPH7Q9BTV6 452 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 INTS7Q9NVH2 962 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 STOX2Q9P2F5 926 aaPredicted RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 KCND3Q9UK17 655 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 PDE10AQ9Y233 779 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 PCDHGA6Q9Y5G7 932 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 NUP210LQ5VU65 1888 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNX3-204ENST00000426155 ZBTB14O43829 449 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 MED26O95402 600 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 C1QAP02745 245 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 KLK3P07288 261 aaPredicted RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 ITGAXP20702 1163 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 PTPN4P29074 926 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 CMPK1P30085 196 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 GCGRP47871 477 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 RGS4P49798 205 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 TBPL1P62380 186 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 EFTUD2Q15029 972 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNX3-204ENST00000426155 ICE2Q659A1 982 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 BORAQ6PGQ7 559 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 SLC26A11Q86WA9 606 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 CEP97Q8IW35 865 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 GBP5Q96PP8 586 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 ATG10Q9H0Y0 220 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 CAB39LQ9H9S4 337 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 CORO1CQ9ULV4 474 aaPredicted RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 SH2B3Q9UQQ2 575 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 VWA7Q9Y334 891 aa13.06□□□□□ -0.32
SNX3-204ENST00000426155 TNRC6AQ8NDV7 1962 aaKnown RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 TLN1Q9Y490 2541 aaKnown RBP13.06□□□□□ -0.32
SNX3-204ENST00000426155 SPENQ96T58 3664 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 LOC102723532A0A0G2JNH3 316 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 OR2A25A4D2G3 310 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 CNOT3O75175 753 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 C8GP07360 202 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZNF37AP17032 561 aaPredicted RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 POLE2P56282 527 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 VSX2P58304 361 aaPredicted RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 TAS2R39P59534 338 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 IL2P60568 153 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 RPS15P62841 145 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 MC1RQ01726 317 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZXDCQ2QGD7 858 aaPredicted RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 LRRC8EQ6NSJ5 796 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 RHBDD2Q6NTF9 364 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 TTLL10Q6ZVT0 673 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 RNF44Q7L0R7 432 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 PAQR7Q86WK9 346 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 PLD3Q8IV08 490 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 OR4N4Q8N0Y3 316 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZNF843Q8N446 348 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 ANKRD49Q8WVL7 239 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 WBP1Q96G27 269 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 VPS39Q96JC1 886 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 UNKQ9C0B0 810 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 ZDHHC18Q9NUE0 388 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 DMGDHQ9UI17 866 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 FARSAQ9Y285 508 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
SNX3-204ENST00000426155 KLK4Q9Y5K2 254 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 AP1M2Q9Y6Q5 423 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 MED13Q9UHV7 2174 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 COL6A6A6NMZ7 2263 aa13.05□□□□□ -0.32
SNX3-204ENST00000426155 NPEPPSL1A6NEC2 478 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 FAM159BA6NKW6 160 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 TK2O00142 265 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CDC7O00311 574 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 HAT1O14929 419 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 FAM155BO75949 473 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 DNAJB5O75953 348 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms