RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PRR35P0CG20 571 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TPBGLP0DKB5 382 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CAPN3P20807 821 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MCM3P25205 808 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PSMA3P25788 255 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FOXN2P32314 431 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RPA3P35244 121 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 AVPR1BP47901 424 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MARCKSL1P49006 195 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KCNK10P57789 538 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ANKRD20A4Q4UJ75 823 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KRTCAP3Q53RY4 240 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MEI1Q5TIA1 1274 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KLHDC8BQ8IXV7 354 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LINC01555Q8NAE3 123 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MMABQ96EY8 250 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MAGED4Q96JG8 741 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF354BQ96LW1 612 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EBNA1BP2Q99848 306 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TRIM56Q9BRZ2 755 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FRMD8P1Q9BZ68 369 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MRPS30Q9NP92 439 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FAM114A2Q9NRY5 505 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CATSPERZQ9NTU4 200 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PLA2G3Q9NZ20 509 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ITGB1BP2Q9UKP3 347 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR5H15A6NDH6 313 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR51F1A6NGY5 319 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IDSB3KWA1 339 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR1I1O60431 355 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 AGAP20933 346 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 AOAHP28039 575 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PEBP1P30086 187 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SSTR2P30874 369 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FOXL2P58012 376 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TSTA3Q13630 321 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF630Q2M218 657 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CCDC38Q502W7 563 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PCID2Q5JVF3 399 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 COX15Q7KZN9 410 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MPP5Q8N3R9 675 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TAB3Q8N5C8 712 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SIRT6Q8N6T7 355 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR2L3Q8NG85 312 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 HMGCLL1Q8TB92 370 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 BRIX1Q8TDN6 353 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CHTF18Q8WVB6 975 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 C8orf44Q96CB5 159 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF285Q96NJ3 590 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IL17FQ96PD4 163 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PANX2Q96RD6 677 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TMEM121Q9BTD3 319 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF148Q9UQR1 794 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CACNA1DQ01668 2161 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 A8MUI8 341 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CD3EAPO15446 510 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PRAMEF2O60811 474 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SUN1O94901 812 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 C1orf105O95561 183 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IFNB1P01574 187 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CHRM3P20309 590 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CA7P43166 264 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 GCGRP47871 477 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 DSG2Q14126 1118 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MFSD4BQ5TF39 518 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FAAH2Q6GMR7 532 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MRNIPQ6NTE8 343 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 C4orf22Q6V702 233 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KIAA1328Q86T90 577 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CCDC89Q8N998 374 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SMPDL3AQ92484 453 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 DPH7Q9BTV6 452 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PIH1D1Q9NWS0 290 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CIDEBQ9UHD4 219 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SH3BGRL2Q9UJC5 107 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MKL2Q9ULH7 1088 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KLK4Q9Y5K2 254 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MED13Q9UHV7 2174 aa11.68□□□□□ -0.54
HLA-DQB3-203ENST00000425319 UNC79Q9P2D8 2635 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IGHV1-45A0A0A0MS14 117 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 BTNL10A8MVZ5 291 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 E5RI56 91 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 WDPCPO95876 746 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CYC1P08574 325 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SNRPB2P08579 225 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 C8orf89P0DMQ9 161 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PRF1P14222 555 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms