RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 USP45Q70EL2 814 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SFTPA1Q8IWL2 248 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ZBTB8BQ8NAP8 495 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 GLB1L3Q8NCI6 653 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 LZICQ8WZA0 190 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 FAM120BQ96EK7 910 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 NTMT1Q9BV86 223 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 PLA2G2FQ9BZM2 168 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 FANCEQ9HB96 536 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TRPV5Q9NQA5 729 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 PCDHB14Q9Y5E9 798 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 A0A1W2PPW3 197 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ANTXRLA6NF34 631 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 H0YAE9 185 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 H3BMQ9 156 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 AREL1O15033 823 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SERPINA1P01009 418 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SRCP12931 536 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 LHCGRP22888 699 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TACR1P25103 407 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 POLR2IP36954 125 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 DGKGP49619 791 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 NUP107P57740 925 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 RPS14P62263 151 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 SNRPD1P62314 119 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 B4GALNT1Q00973 533 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 VAC14Q08AM6 782 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ADAM15Q13444 863 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SKIV2LQ15477 1246 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 USP39Q53GS9 565 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 PARM1Q6UWI2 310 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 C10orf111Q8N326 155 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 RNF175Q8N4F7 328 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 AADATQ8N5Z0 425 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 CDC26Q8NHZ8 85 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 UBTD2Q8WUN7 234 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SGCDQ92629 289 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 COG8Q96MW5 612 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 CCDC115Q96NT0 180 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SH3GL1Q99961 368 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 EBPLQ9BY08 206 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ATG10Q9H0Y0 220 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 GORASP2Q9H8Y8 452 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ZDHHC3Q9NYG2 299 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 DNAJB9Q9UBS3 223 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SLC25A13Q9UJS0 675 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 CDH7Q9ULB5 785 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 PAIP2BQ9ULR5 123 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 NUP214P35658 2090 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 UPK3BL1B0FP48 263 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 UPK3BL2E5RIL1 263 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 HS6ST1O60243 411 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 EPORP19235 508 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 POLR2EP19388 210 aaKnown RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 ENTPD1P49961 510 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 HLCSP50747 726 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 PHC1P78364 1004 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 RUNDC3AQ59EK9 446 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 VITQ6UXI7 678 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TPRG1Q6ZUI0 275 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 VRK3Q8IV63 474 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 YAF2Q8IY57 180 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 MICU2Q8IYU8 434 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 C8orf59Q8N0T1 100 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 USP7Q93009 1102 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 APOLD1Q96LR9 279 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 H2AFJQ9BTM1 129 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SLC32A1Q9H598 525 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 EXD2Q9NVH0 621 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 CIDEBQ9UHD4 219 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 TRIM64A6NGJ6 449 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PFDN1O60925 122 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ADH1CP00326 375 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 FUT4P22083 530 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PIGAP37287 484 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 HALP42357 657 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PTSQ03393 145 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 FOXD4Q12950 439 aaPredicted RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 C16orf72Q14CZ0 275 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PON2Q15165 354 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PTCHD3Q3KNS1 767 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 FGD3Q5JSP0 725 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 C16orf87Q6PH81 154 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SERPINA13PQ6UXR4 307 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 THAP5Q7Z6K1 395 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ADIPOR2Q86V24 386 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ZNF555Q8NEP9 628 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ADAMTS16Q8TE57 1224 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms