RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TLDC1Q6P9B6 456 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 CNSTQ6PJW8 725 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 CENPUQ71F23 418 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 CILP2Q8IUL8 1156 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 ANKMY2Q8IV38 441 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 MCATQ8IVS2 390 aaKnown RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 CISD2Q8N5K1 135 aaKnown RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 C2orf73Q8N5S3 287 aaPredicted RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 SPATA4Q8NEY3 305 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 PTERQ96BW5 349 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 IP6K3Q96PC2 410 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 TCF12Q99081 682 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 EBNA1BP2Q99848 306 aaKnown RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 SLAMF7Q9NQ25 335 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 ASF1BQ9NVP2 202 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 CUEDC1Q9NWM3 386 aaPredicted RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 ERRFI1Q9UJM3 462 aaPredicted RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 PLCL2Q9UPR0 1127 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 RUVBL2Q9Y230 463 aaKnown RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 CSAG2Q9Y5P2 127 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 ZGRF1Q86YA3 2104 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 ISM1B1AKI9 464 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 SOCS6O14544 535 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 KPNA5O15131 536 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 KDM1AO60341 852 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 URI1O94763 535 aaPredicted RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 SLCO2B1O94956 709 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 SEC31AO94979 1220 aaKnown RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 CLDN1O95832 211 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 LDLRP01130 860 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 ERVK-10P10266 1014 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 MCM3P25205 808 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 IVDP26440 423 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 ELK3P41970 407 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 BDKRB1P46663 353 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 RAB28P51157 221 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 ARL4CP56559 192 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 HIF1AQ16665 826 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 CCSMST1Q4G0I0 132 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 SPANXN3Q5MJ09 141 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 HIBCHQ6NVY1 386 aaPredicted RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 TTC23LQ6PF05 361 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 IGFL2Q6UWQ7 119 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 Q6ZS92 163 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 OVCH1Q7RTY7 1134 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 DTWD1Q8N5C7 304 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 BIRC8Q96P09 236 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 SPSB2Q99619 263 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 MESP1Q9BRJ9 268 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 FAM167BQ9BTA0 163 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 INTS10Q9NVR2 710 aaKnown RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 IFT80Q9P2H3 777 aaPredicted RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 ZC3H7BQ9UGR2 993 aaKnown RBP12.43□□□□□ -0.42
VRK3-203ENST00000424804 SLC39A10Q9ULF5 831 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 B3GNT3Q9Y2A9 372 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 PADI2Q9Y2J8 665 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 FAM169AQ9Y6X4 670 aa12.43□□□□□ -0.42
VRK3-203ENST00000424804 HEATR5BQ9P2D3 2071 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 KRT87PA6NCN2 255 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 H3BMM5 538 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 MAP3K7O43318 606 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 RAD51CO43502 376 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 CTSVO60911 334 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 S1PR4O95977 384 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 ESR1P03372 595 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 RPN2P04844 631 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 CD9P21926 228 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 FOLR3P41439 243 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 GRIA3P42263 894 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
VRK3-203ENST00000424804 CARSP49589 748 aaKnown RBP12.42□□□□□ -0.42
VRK3-203ENST00000424804 PDIA2Q13087 525 aaKnown RBP12.42□□□□□ -0.42
VRK3-203ENST00000424804 CALCOCO2Q13137 446 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 NR6A1Q15406 480 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 NKG7Q16617 165 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 FIGLAQ6QHK4 219 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 CAPN12Q6ZSI9 719 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 CUZD1Q86UP6 607 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 IGDCC3Q8IVU1 814 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 OR2L8Q8NGY9 312 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
VRK3-203ENST00000424804 DENND1AQ8TEH3 1009 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 C17orf62Q9BQA9 187 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 SLC26A1Q9H2B4 701 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 SLC6A20Q9NP91 592 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 SLC17A6Q9P2U8 582 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms